RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 OR5AL1P0C617 328 aa12.37□□□□□ -0.43
USF2-202ENST00000343550 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
USF2-202ENST00000343550 K7EN84 100 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 CRYGDP07320 174 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
USF2-202ENST00000343550 P01737 135 aa12.35□□□□□ -0.43
USF2-202ENST00000343550 GZMBP10144 247 aa12.35□□□□□ -0.43
USF2-202ENST00000343550 RPS20P60866 119 aaKnown RBP12.35□□□□□ -0.43
USF2-202ENST00000343550 RHOHQ15669 191 aa12.35□□□□□ -0.43
USF2-202ENST00000343550 A0A087WWL8 130 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 C16orf90A8MZG2 172 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 NXPH4O95158 308 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
USF2-202ENST00000343550 CEBPGP53567 150 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 SH2D6Q7Z4S9 175 aa12.34□□□□□ -0.43
USF2-202ENST00000343550 RHODO00212 210 aa12.33□□□□□ -0.44
USF2-202ENST00000343550 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
USF2-202ENST00000343550 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
USF2-202ENST00000343550 RYR1P21817 5038 aa12.33□□□□□ -0.44
USF2-202ENST00000343550 SPANXN1Q5VSR9 72 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 KRTAP4-5Q9BYR2 181 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 RNASE7Q9H1E1 156 aaKnown RBP12.32□□□□□ -0.44
USF2-202ENST00000343550 Q9UF83 564 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 XKRY2A2RUG3 117 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 SSTP61278 116 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 C14orf178Q8N769 122 aaPredicted RBP12.32□□□□□ -0.44
USF2-202ENST00000343550 FER1L6-AS1Q8NA97 138 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 LY96Q9Y6Y9 160 aa12.32□□□□□ -0.44
USF2-202ENST00000343550 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
USF2-202ENST00000343550 SIVA1O15304 175 aa12.3□□□□□ -0.44
USF2-202ENST00000343550 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
USF2-202ENST00000343550 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 C9JQL5 133 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 F2Z2F3 143 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 CDK2AP2O75956 126 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 TIRAPP58753 221 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 SRSF3P84103 164 aaKnown RBP12.29□□□□□ -0.44
USF2-202ENST00000343550 TTC32Q5I0X7 151 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 KRTAP1-5Q9BYS1 174 aa12.29□□□□□ -0.44
USF2-202ENST00000343550 RPP21Q9H633 154 aaKnown RBP12.29□□□□□ -0.44
USF2-202ENST00000343550 LYZL1Q6UWQ5 148 aa12.28□□□□□ -0.44
USF2-202ENST00000343550 ATP6V0E2Q8NHE4 81 aa12.28□□□□□ -0.44
USF2-202ENST00000343550 MSRB1Q9NZV6 116 aa12.28□□□□□ -0.44
USF2-202ENST00000343550 A0A1W2PPQ1 181 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 GAGE12JA6NER3 117 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 RAB4BP61018 213 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 GAGE1Q13065 139 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 GAGE4Q13068 117 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 GAGE5Q13069 117 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 PEA15Q15121 130 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 GAGE13Q4V321 117 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 LINC01551Q86U37 167 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 KIF25-AS1Q9Y6Z4 181 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 HSPG2P98160 4391 aa12.27□□□□□ -0.44
USF2-202ENST00000343550 LINC00694P0DN24 101 aa12.27□□□□□ -0.45
USF2-202ENST00000343550 CACNG7P62955 275 aa12.27□□□□□ -0.45
USF2-202ENST00000343550 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
USF2-202ENST00000343550 SMDT1Q9H4I9 107 aa12.27□□□□□ -0.45
USF2-202ENST00000343550 ABCA13Q86UQ4 5058 aa12.26□□□□□ -0.45
USF2-202ENST00000343550 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
USF2-202ENST00000343550 SPATA12Q7Z6I5 190 aa12.26□□□□□ -0.45
USF2-202ENST00000343550 WFDC10BQ8IUB3 73 aa12.26□□□□□ -0.45
USF2-202ENST00000343550 GATCO43716 136 aaKnown RBP12.25□□□□□ -0.45
USF2-202ENST00000343550 NTF3P20783 257 aa12.25□□□□□ -0.45
USF2-202ENST00000343550 LINC00315P59091 139 aa12.25□□□□□ -0.45
USF2-202ENST00000343550 ERVFC1-1P60608 527 aa12.25□□□□□ -0.45
USF2-202ENST00000343550 FAM74A3Q4VXF1 159 aa12.25□□□□□ -0.45
USF2-202ENST00000343550 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
USF2-202ENST00000343550 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
USF2-202ENST00000343550 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
USF2-202ENST00000343550 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
USF2-202ENST00000343550 F5H697 171 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
USF2-202ENST00000343550 CTRLP40313 264 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 ZNF56Q15929 161 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 LELP1Q5T871 98 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
USF2-202ENST00000343550 A8MWL6 223 aa12.22□□□□□ -0.45
USF2-202ENST00000343550 DNAH10OSP0CZ25 163 aa12.22□□□□□ -0.45
USF2-202ENST00000343550 RAB14P61106 215 aa12.22□□□□□ -0.45
USF2-202ENST00000343550 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
USF2-202ENST00000343550 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
USF2-202ENST00000343550 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
USF2-202ENST00000343550 EVI2AP22794 236 aa12.21□□□□□ -0.45
USF2-202ENST00000343550 FOXA3P55318 350 aaPredicted RBP12.21□□□□□ -0.45
USF2-202ENST00000343550 CT83Q5H943 113 aa12.21□□□□□ -0.45
USF2-202ENST00000343550 OSTCQ9NRP0 149 aa12.21□□□□□ -0.45
USF2-202ENST00000343550 TRAV9-2A0A087WT02 112 aa12.21□□□□□ -0.46
USF2-202ENST00000343550 IGHV3-38A0A0C4DH36 116 aa12.21□□□□□ -0.46
USF2-202ENST00000343550 K7EP13 123 aa12.21□□□□□ -0.46
USF2-202ENST00000343550 RPL23P62829 140 aaKnown RBP12.21□□□□□ -0.46
USF2-202ENST00000343550 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms