RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 IGKV2D-26A0A0A0MRZ7 120 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 FSTL3O95633 263 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 ZNRF2Q8NHG8 242 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 TEX49A0A1B0GTD5 131 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 IGF2-ASQ6U949 168 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 SYNJ2BPP57105 145 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 RBMY1FQ15415 496 aaKnown RBP3.68□□□□□ -1.82
CSMD3-203ENST00000343508 Q6Q795 121 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 Q9H8V8 135 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 NACAE9PAV3 2078 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 MED13Q9UHV7 2174 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 FANCD2OSQ96PS1 177 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 TRBV30A0A0K0K1B3 111 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 JMJD7-PLA2G4BH0Y9G9 81 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 MSRB2Q9Y3D2 182 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 DSCAMO60469 2012 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 TINCRA0A1B0GVN0 87 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 C5orf56Q8N8D9 126 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 A0A0J9YY99 117 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 HHLA3Q9XRX5 114 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 MIAQ16674 131 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 DEFB131AP59861 70 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 CENPVL3A0A0U1RRI6 287 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 SEM1Q6ZVN7 128 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 Q8N1Y9 231 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 NRACQ8N912 160 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 PTH2Q96A98 100 aa3.67□□□□□ -1.82
CSMD3-203ENST00000343508 PRAC2D3DTV9 90 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 CRYGBP07316 175 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 TMEM256-PLSCR3K7ERE1 68 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 NSUN5P1Q3KNT7 163 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 ZMAT4Q9H898 229 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 PRR14LQ5THK1 2151 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 A0A1B0GX51 115 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 LINC01356Q8N9X3 169 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 PFN2P35080 140 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
CSMD3-203ENST00000343508 MAPKAPK5-AS1Q8N8E1 139 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 PCSK5Q92824 1860 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 TMEM223A0PJW6 202 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 MSMBP08118 114 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 MSMPQ1L6U9 139 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 TRBV7-3A0A075B6L6 115 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGKV2-29A2NJV5 120 aaPredicted RBP3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 RUSC1-AS1Q66K80 236 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 LAMA2P24043 3122 aaKnown RBP3.66□□□□□ -1.82
CSMD3-203ENST00000343508 A0A0J9YXV3 536 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 ODF3Q96PU9 254 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-53P01767 116 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 C20orf203Q8NBC4 194 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 CLEC2BQ92478 149 aa3.66□□□□□ -1.82
CSMD3-203ENST00000343508 C5orf47Q569G3 176 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 KNCNA6PVL3 124 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-33P01772 117 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 HIST2H2BCQ6DN03 193 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 HIST2H2BDQ6DRA6 164 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 F6UB75 175 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 C3orf22Q8N5N4 141 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 SVIPQ8NHG7 77 aa3.65□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV3-38A0A0C4DH36 116 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 K7ENP7 123 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 A0A0J9YXY3 114 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 K7EMT4 169 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 IGHV4-4A0A075B6R2 117 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 J3QLI3 93 aa3.65□□□□□ -1.83
CSMD3-203ENST00000343508 IGHV3-16A0A0C4DH30 117 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 A0A1W2PRX2 142 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 hADV29S1A0JD25 119 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 IGHG2P01859 326 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 UBE2D3P61077 147 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 UBE2D2P62837 147 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 HAMPP81172 84 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 MALRD1Q5VYJ5 2156 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 WDFY3Q8IZQ1 3526 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 BRWD1Q9NSI6 2320 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 K7EQD1 137 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 PIP4P1Q86T03 277 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 XCL2Q9UBD3 114 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 TMEM258P61165 79 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 VSIG2Q96IQ7 327 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 A0A0J9YX75 114 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 CRLF1O75462 422 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 XGP55808 180 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 AHCTF1Q8WYP5 2266 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 TIMM17BO60830 172 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 UBE2E2Q96LR5 201 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 SMAD5-AS1Q9Y6J3 95 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 TRIAP1O43715 76 aa3.64□□□□□ -1.83
CSMD3-203ENST00000343508 CLUHP3Q96NS8 147 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms