RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SUMO4Q6EEV6 95 aa7.25□□□□□ -1.25
HOXA1-201ENST00000343060 SPANXA1Q9NS26 97 aa7.25□□□□□ -1.25
HOXA1-201ENST00000343060 APC2O95996 2303 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 TRBV30A0A0K0K1B3 111 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 G3V318 75 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 J3KRW8 73 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 M0R2P5 195 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 LGALS9O00182 355 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 IFITM1P13164 125 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 MRPL23Q16540 153 aaKnown RBP7.24□□□□□ -1.25
HOXA1-201ENST00000343060 NSUN5P1Q3KNT7 163 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 C19orf54Q5BKX5 351 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 ADGRG4Q8IZF6 3080 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 CEP250Q9BV73 2442 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 GNRH2O43555 120 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 RHOHQ15669 191 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 PRR30Q53SZ7 412 aaPredicted RBP7.24□□□□□ -1.25
HOXA1-201ENST00000343060 RAX2Q96IS3 184 aa7.24□□□□□ -1.25
HOXA1-201ENST00000343060 BSNQ9UPA5 3926 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 FAM223BA6NKX1 122 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 LY6HO94772 140 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 ELANEP08246 267 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 FAM223AQ8IWN6 122 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 FAM110AQ9BQ89 295 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 CNOT1A5YKK6 2376 aaKnown RBP7.23□□□□□ -1.25
HOXA1-201ENST00000343060 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 CCDC179H3BU77 68 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
HOXA1-201ENST00000343060 RNASE4P34096 147 aaKnown RBP7.23□□□□□ -1.25
HOXA1-201ENST00000343060 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
HOXA1-201ENST00000343060 KLLNB2CW77 178 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 FBXL19-AS1Q494R0 122 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 C11orf71Q6IPW1 123 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 LINC01560Q8TB33 94 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 MDFICQ9P1T7 246 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 FAM240AA0A1B0GVK7 77 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 H3BMM0 161 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 ARL3P36405 182 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 TTC32Q5I0X7 151 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 UBE2WQ96B02 151 aa7.22□□□□□ -1.25
HOXA1-201ENST00000343060 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 H3BT86 120 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 NDUFA4O00483 81 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 TRIAP1O43715 76 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
HOXA1-201ENST00000343060 UBE2E1P51965 193 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 TCF15Q12870 199 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 DEFB121Q5J5C9 76 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 C5orf56Q8N8D9 126 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 LITAFQ99732 161 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 TEX49A0A1B0GTD5 131 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 DEFB1P60022 68 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 C15orf53Q8NAA6 179 aa7.21□□□□□ -1.26
HOXA1-201ENST00000343060 ABCA4P78363 2273 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 A0A0J9YXY3 114 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 JPT2Q9H910 190 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 OTOGLQ3ZCN5 2332 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 C9orf85Q96MD7 179 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 TACC2O95359 2948 aa7.2□□□□□ -1.26
HOXA1-201ENST00000343060 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 SPANXCQ9NY87 97 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 MAP1BP46821 2468 aaKnown RBP7.19□□□□□ -1.26
HOXA1-201ENST00000343060 F6UB75 175 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 H7C2G1 150 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 M0QY20 66 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 Q1RN00 199 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 C20orf203Q8NBC4 194 aa7.19□□□□□ -1.26
HOXA1-201ENST00000343060 A0A087WWL8 130 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 TRBV7-7A0A0K0K1E9 115 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 H7C423 109 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 BRI3O95415 125 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 SAA4P35542 130 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 CFAP161Q6P656 301 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 FAM159AQ6UWV7 190 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 ICOSQ9Y6W8 199 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 PIEZO2Q9H5I5 2752 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 IGLV4-3A0A075B6K6 122 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 GRNP28799 593 aaKnown RBP7.18□□□□□ -1.26
HOXA1-201ENST00000343060 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 DEFB123Q8N688 67 aa7.18□□□□□ -1.26
HOXA1-201ENST00000343060 OPRPNQ99935 248 aaPredicted RBP7.18□□□□□ -1.26
HOXA1-201ENST00000343060 ANKHD1Q8IWZ3 2542 aaKnown RBP7.17□□□□□ -1.26
HOXA1-201ENST00000343060 TRBV12-3P01733 135 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 MGAQ8IWI9 3026 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 F5H697 171 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 DEFB104AQ8WTQ1 72 aa7.17□□□□□ -1.26
HOXA1-201ENST00000343060 IGHV3-16A0A0C4DH30 117 aa7.16□□□□□ -1.26
HOXA1-201ENST00000343060 LST1O00453 97 aa7.16□□□□□ -1.26
HOXA1-201ENST00000343060 ZNF580Q9UK33 172 aa7.16□□□□□ -1.26
HOXA1-201ENST00000343060 ZNF256Q9Y2P7 627 aaPredicted RBP7.16□□□□□ -1.26
HOXA1-201ENST00000343060 MOB4Q9Y3A3 225 aa7.16□□□□□ -1.26
HOXA1-201ENST00000343060 H3BUA1 57 aa7.16□□□□□ -1.26
HOXA1-201ENST00000343060 MRPS36P82909 103 aaKnown RBP7.16□□□□□ -1.26
HOXA1-201ENST00000343060 FOXC1Q12948 553 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms