RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 F5H697 171 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 CXCL1P09341 107 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 TWIST1Q15672 202 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 LGALS9CQ6DKI2 356 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 C15orf54Q8N8G6 183 aa9.17□□□□□ -0.94
TUBD1-202ENST00000340993 SSBP4Q9BWG4 385 aaPredicted RBP9.17□□□□□ -0.94
TUBD1-202ENST00000340993 GAGE12JA6NER3 117 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 NDUFS6O75380 124 aaKnown RBP9.16□□□□□ -0.94
TUBD1-202ENST00000340993 CRYGDP07320 174 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 NTF3P20783 257 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 SRIP30626 198 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 GAGE1Q13065 139 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 GAGE4Q13068 117 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 GAGE5Q13069 117 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 ESRGQ1W209 222 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 GAGE13Q4V321 117 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 OR10G8Q8NGN5 311 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
TUBD1-202ENST00000340993 SMIM17P0DL12 118 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 FOXA3P55318 350 aaPredicted RBP9.15□□□□□ -0.94
TUBD1-202ENST00000340993 SLAQ13239 276 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 UFSP1Q6NVU6 142 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 PTH2Q96A98 100 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 AP1S3Q96PC3 154 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 V9GYV3 84 aa9.15□□□□□ -0.94
TUBD1-202ENST00000340993 HIGD1CA8MV81 97 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 A8MWL6 223 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 F8W036 122 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 NXPH4O95158 308 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 EVI2AP22794 236 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 A0A1W2PPQ1 181 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 CTRLP40313 264 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 CCL18P55774 89 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 RHOHQ15669 191 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 DNAH6Q9C0G6 4158 aa9.14□□□□□ -0.95
TUBD1-202ENST00000340993 RHODO00212 210 aa9.13□□□□□ -0.95
TUBD1-202ENST00000340993 CACNG7P62955 275 aa9.13□□□□□ -0.95
TUBD1-202ENST00000340993 MRPL23Q16540 153 aaKnown RBP9.13□□□□□ -0.95
TUBD1-202ENST00000340993 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
TUBD1-202ENST00000340993 F2Z2F3 143 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 ZFP2Q6ZN57 461 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 TRAV26-2A0A0B4J265 109 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 TMEM218A2RU14 115 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 RNF212Q495C1 297 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 PIK3CD-AS1Q5SR53 167 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 NEGR1Q7Z3B1 354 aa9.12□□□□□ -0.95
TUBD1-202ENST00000340993 FRAS1Q86XX4 4008 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 IGHV3-38A0A0C4DH36 116 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 LINC00862A6NCI5 91 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 H3BNG1 76 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 UQCC3Q6UW78 93 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 LYPD5Q6UWN5 251 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 ZNRF2Q8NHG8 242 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
TUBD1-202ENST00000340993 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
TUBD1-202ENST00000340993 CT83Q5H943 113 aa9.1□□□□□ -0.95
TUBD1-202ENST00000340993 KIF25-AS1Q9Y6Z4 181 aa9.1□□□□□ -0.95
TUBD1-202ENST00000340993 SUMO4Q6EEV6 95 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 MRPL54Q6P161 138 aaKnown RBP9.09□□□□□ -0.95
TUBD1-202ENST00000340993 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 A0A1B0GUT8 65 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 LINC00315P59091 139 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 RAB4BP61018 213 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 ATP6V0E2Q8NHE4 81 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
TUBD1-202ENST00000340993 CIDEAO60543 219 aa9.08□□□□□ -0.96
TUBD1-202ENST00000340993 CAMPP49913 170 aa9.08□□□□□ -0.96
TUBD1-202ENST00000340993 FAM3BP58499 235 aaPredicted RBP9.08□□□□□ -0.96
TUBD1-202ENST00000340993 WFDC10BQ8IUB3 73 aa9.08□□□□□ -0.96
TUBD1-202ENST00000340993 NAT8BQ9UHF3 227 aa9.08□□□□□ -0.96
TUBD1-202ENST00000340993 SMIM15Q7Z3B0 74 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 Q9H8V8 135 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 SMIM27A0A1W2PRY6 76 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
TUBD1-202ENST00000340993 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
TUBD1-202ENST00000340993 MT-ND4LP03901 98 aa9.06□□□□□ -0.96
TUBD1-202ENST00000340993 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
TUBD1-202ENST00000340993 PNRC1Q12796 327 aaPredicted RBP9.06□□□□□ -0.96
TUBD1-202ENST00000340993 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
TUBD1-202ENST00000340993 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
TUBD1-202ENST00000340993 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
TUBD1-202ENST00000340993 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
TUBD1-202ENST00000340993 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
TUBD1-202ENST00000340993 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
TUBD1-202ENST00000340993 NCR2O95944 276 aa9.05□□□□□ -0.96
TUBD1-202ENST00000340993 RIGQ13278 110 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms