RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SRSF2Q01130 221 aaKnown RBP11.38□□□□□ -0.59
RRP1B-201ENST00000340648 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
RRP1B-201ENST00000340648 AJUBAQ96IF1 538 aa11.38□□□□□ -0.59
RRP1B-201ENST00000340648 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
RRP1B-201ENST00000340648 MAPKAPK5-AS1Q8N8E1 139 aa11.38□□□□□ -0.59
RRP1B-201ENST00000340648 LAMTOR3Q9UHA4 124 aa11.38□□□□□ -0.59
RRP1B-201ENST00000340648 TRAV26-1A0A087WT03 109 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 NSUN5P1Q3KNT7 163 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 CRYGBP07316 175 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 LINC01356Q8N9X3 169 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 SPANXA1Q9NS26 97 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 BLCAPP62952 87 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
RRP1B-201ENST00000340648 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 Q9H8V8 135 aa11.37□□□□□ -0.59
RRP1B-201ENST00000340648 H3BUA1 57 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 DEFB130BP0DP73 79 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 DEFB130AP0DP74 79 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 SPG11Q96JI7 2443 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 RS1O15537 224 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 U3KQK5 164 aa11.36□□□□□ -0.59
RRP1B-201ENST00000340648 UNQ9165/PRO28630Q6UXU0 137 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 OPRPNQ99935 248 aaPredicted RBP11.35□□□□□ -0.59
RRP1B-201ENST00000340648 HERVK_113P63121 156 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 ICOSQ9Y6W8 199 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 IGHG4P01861 327 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
RRP1B-201ENST00000340648 LINC01619G3V211 115 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 DAND5Q8N907 189 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 TCL1BO95988 128 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 Q8N1Y9 231 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 SOCS3O14543 225 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 TRBV12-3P01733 135 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
RRP1B-201ENST00000340648 ATP6V0E2Q8NHE4 81 aa11.33□□□□□ -0.6
RRP1B-201ENST00000340648 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
RRP1B-201ENST00000340648 RNF223E7ERA6 249 aa11.33□□□□□ -0.6
RRP1B-201ENST00000340648 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
RRP1B-201ENST00000340648 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
RRP1B-201ENST00000340648 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
RRP1B-201ENST00000340648 IGF1P05019 195 aa11.32□□□□□ -0.6
RRP1B-201ENST00000340648 MT-ATP8P03928 68 aa11.32□□□□□ -0.6
RRP1B-201ENST00000340648 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
RRP1B-201ENST00000340648 NXPH4O95158 308 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 SS18Q15532 418 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 GATA3P23771 443 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
RRP1B-201ENST00000340648 SMAD5-AS1Q9Y6J3 95 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 NEXN-AS1Q8NBZ9 246 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 U3KQE9 123 aa11.31□□□□□ -0.6
RRP1B-201ENST00000340648 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 GHRHP01286 108 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
RRP1B-201ENST00000340648 Q6ZUT4 128 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 SMIM20Q8N5G0 67 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 CEP192Q8TEP8 1941 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 TRAV13-2A0A0B4J235 113 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 MDFICQ9P1T7 246 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
RRP1B-201ENST00000340648 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
RRP1B-201ENST00000340648 ODF3BA8MYP8 253 aa11.29□□□□□ -0.6
RRP1B-201ENST00000340648 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
RRP1B-201ENST00000340648 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
RRP1B-201ENST00000340648 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
RRP1B-201ENST00000340648 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
RRP1B-201ENST00000340648 RNF183Q96D59 192 aa11.28□□□□□ -0.6
RRP1B-201ENST00000340648 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.6
RRP1B-201ENST00000340648 Q8NA96 180 aa11.27□□□□□ -0.6
RRP1B-201ENST00000340648 ELANEP08246 267 aa11.27□□□□□ -0.61
RRP1B-201ENST00000340648 TNRC6BQ9UPQ9 1833 aaKnown RBP11.27□□□□□ -0.61
RRP1B-201ENST00000340648 ADORA2A-AS1P86434 159 aa11.27□□□□□ -0.61
RRP1B-201ENST00000340648 C3orf56Q8N813 242 aa11.27□□□□□ -0.61
RRP1B-201ENST00000340648 CEMP1Q6PRD7 247 aaPredicted RBP11.27□□□□□ -0.61
RRP1B-201ENST00000340648 C20orf203Q8NBC4 194 aa11.27□□□□□ -0.61
RRP1B-201ENST00000340648 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
RRP1B-201ENST00000340648 IGHV3-30-3P0DP02 117 aa11.26□□□□□ -0.61
RRP1B-201ENST00000340648 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
RRP1B-201ENST00000340648 BPTFQ12830 3046 aa11.26□□□□□ -0.61
RRP1B-201ENST00000340648 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
RRP1B-201ENST00000340648 COL5A1P20908 1838 aaPredicted RBP11.25□□□□□ -0.61
RRP1B-201ENST00000340648 FAM236AA0A1B0GUQ0 79 aa11.25□□□□□ -0.61
RRP1B-201ENST00000340648 FAM236BA0A1B0GV22 79 aa11.25□□□□□ -0.61
RRP1B-201ENST00000340648 SLURP1P55000 103 aa11.25□□□□□ -0.61
RRP1B-201ENST00000340648 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 LGALS9O00182 355 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 A0A0J9YY99 117 aa11.24□□□□□ -0.61
RRP1B-201ENST00000340648 NOP10Q9NPE3 64 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms