RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 MRPL23Q16540 153 aaKnown RBP9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 TMEM241Q24JQ0 296 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 ZNF674Q2M3X9 581 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
SIRPB3P-201ENST00000340424 PEX7O00628 323 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 GNRH2O43555 120 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 ANAPC16Q96DE5 110 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 BTF3L4Q96K17 158 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 C8orf49Q96NF6 230 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 SMIM7Q9BQ49 75 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 NIT2Q9NQR4 276 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 HERC2O95714 4834 aa9.21□□□□□ -0.94
SIRPB3P-201ENST00000340424 C9JCJ5 164 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 S100A2P29034 98 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 UBE2G2P60604 165 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 NEGR1Q7Z3B1 354 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 SH2D6Q7Z4S9 175 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 PTH2Q96A98 100 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 ZNF479Q96JC4 524 aa9.2□□□□□ -0.94
SIRPB3P-201ENST00000340424 PPP1R2P9O14990 202 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 PDE6DO43924 150 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 SRIP30626 198 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 CEBPGP53567 150 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 RPL23P62829 140 aaKnown RBP9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 Q86TA4 180 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 FMC1Q96HJ9 113 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 ZFP30Q9Y2G7 519 aa9.19□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRBV6-1A0A0K0K1D8 114 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 K7EQD1 137 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 SIVA1O15304 175 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRGC2P03986 189 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRGC1P0CF51 173 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 NDUFA6P56556 154 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 ZNF876PQ49A33 203 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 COX8CQ7Z4L0 72 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 FRZBQ92765 325 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 LINC00479Q96M42 142 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 PARLQ9H300 379 aa9.18□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRAV34A0A0B4J273 112 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 K7EP13 123 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 UBE2G1P62253 170 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 CST9LP1Q5W188 147 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 URGCP-MRPS24S4R325 110 aa9.17□□□□□ -0.94
SIRPB3P-201ENST00000340424 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 NXPH4O95158 308 aa9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 GYPEP15421 78 aa9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 ADIRFQ15847 76 aa9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 LYPD5Q6UWN5 251 aa9.16□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRAV9-1A0A075B6T8 112 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 RS1O15537 224 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 S100A4P26447 101 aaKnown RBP9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 ASIPP42127 132 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 TIRAPP58753 221 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 FAM162BQ5T6X4 162 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 LY96Q9Y6Y9 160 aa9.15□□□□□ -0.94
SIRPB3P-201ENST00000340424 TRAV9-2A0A087WT02 112 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 IGKV3D-20A0A0C4DH25 116 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 A8MWV9 139 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 PAGE4O60829 102 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 LTAP01374 205 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 MGST1P10620 155 aaKnown RBP9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 RHOHQ15669 191 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 C11orf52Q96A22 123 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 PRADC1Q9BSG0 188 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 IL36BQ9NZH7 164 aa9.14□□□□□ -0.95
SIRPB3P-201ENST00000340424 KCNIP4Q6PIL6 250 aa9.13□□□□□ -0.95
SIRPB3P-201ENST00000340424 ZFP2Q6ZN57 461 aa9.13□□□□□ -0.95
SIRPB3P-201ENST00000340424 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
SIRPB3P-201ENST00000340424 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
SIRPB3P-201ENST00000340424 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms