RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 DUX3Q96PT4 197 aa8.27□□□□□ -1.09
LRP1-202ENST00000338962 ODF3Q96PU9 254 aa8.27□□□□□ -1.09
LRP1-202ENST00000338962 IGKV3-20P01619 116 aa8.26□□□□□ -1.09
LRP1-202ENST00000338962 ADAMTSL5Q6ZMM2 481 aa8.26□□□□□ -1.09
LRP1-202ENST00000338962 Q6ZVH6 145 aa8.26□□□□□ -1.09
LRP1-202ENST00000338962 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 H0Y8G0 127 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 BVES-AS1Q5T3Y7 98 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 C7orf71A4D174 169 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 GNRH2O43555 120 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 DUSP14O95147 198 aaKnown RBP8.25□□□□□ -1.09
LRP1-202ENST00000338962 HBDP02042 147 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 FOXI2Q6ZQN5 318 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 ZNF747Q9BV97 191 aa8.25□□□□□ -1.09
LRP1-202ENST00000338962 NXT2Q9NPJ8 142 aaKnown RBP8.25□□□□□ -1.09
LRP1-202ENST00000338962 A0A096LNJ9 63 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 COX8AP10176 69 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
LRP1-202ENST00000338962 GATA1P15976 413 aaPredicted RBP8.24□□□□□ -1.09
LRP1-202ENST00000338962 SEC11AP67812 179 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 MDFIQ99750 246 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 SORL1Q92673 2214 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 KRTAP10-3P60369 221 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 HIST2H2BDQ6DRA6 164 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 C11orf44Q8N8P7 122 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 OR2K2Q8NGT1 345 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 DYNLRB2Q8TF09 96 aa8.24□□□□□ -1.09
LRP1-202ENST00000338962 DLX4Q92988 240 aaPredicted RBP8.24□□□□□ -1.09
LRP1-202ENST00000338962 TRAV12-2A0A075B6T6 113 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 SPRY2O43597 315 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 CD7P09564 240 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 AP1S3Q96PC3 154 aa8.23□□□□□ -1.09
LRP1-202ENST00000338962 FXYD7P58549 80 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 C14orf178Q8N769 122 aaPredicted RBP8.22□□□□□ -1.09
LRP1-202ENST00000338962 CITED1Q99966 193 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 DPH3P1Q9H4G8 78 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 TRAV2A0A0B4J234 112 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 A6NDN8 102 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 LGALS9BQ3B8N2 356 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 GTF2H5Q6ZYL4 71 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 NRACQ8N912 160 aa8.22□□□□□ -1.09
LRP1-202ENST00000338962 A0A1W2PRX2 142 aa8.21□□□□□ -1.09
LRP1-202ENST00000338962 LINC01546A6NGU7 62 aa8.21□□□□□ -1.09
LRP1-202ENST00000338962 DEFB131AP59861 70 aa8.21□□□□□ -1.09
LRP1-202ENST00000338962 Q8N8P6 123 aa8.21□□□□□ -1.09
LRP1-202ENST00000338962 AGRNO00468 2067 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 NXPH4O95158 308 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 MGPP08493 103 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 CD28P10747 220 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 UFSP1Q6NVU6 142 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 RAX2Q96IS3 184 aa8.21□□□□□ -1.1
LRP1-202ENST00000338962 MCRIP2Q9BUT9 160 aaKnown RBP8.21□□□□□ -1.1
LRP1-202ENST00000338962 TMEM97Q5BJF2 176 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 MTURNQ8N3F0 131 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 IGHV1OR15-1A0A075B7D0 117 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 CCL24O00175 119 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 SIVA1O15304 175 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 SAP30O75446 220 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 FCER1GP30273 86 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 FHL3Q13643 280 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 DEFB114Q30KQ6 69 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 IFI27L1Q96BM0 104 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 CITED2Q99967 270 aaPredicted RBP8.2□□□□□ -1.1
LRP1-202ENST00000338962 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
LRP1-202ENST00000338962 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
LRP1-202ENST00000338962 IGLV2-18A0A075B6J9 118 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 CD300EQ496F6 205 aaPredicted RBP8.19□□□□□ -1.1
LRP1-202ENST00000338962 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 Q8N1Y9 231 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 C3orf56Q8N813 242 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 WNK1Q9H4A3 2382 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 FBN3Q75N90 2809 aa8.19□□□□□ -1.1
LRP1-202ENST00000338962 IGHV3-16A0A0C4DH30 117 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 ADARB2-AS1A8MUL3 147 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 LAGE3Q14657 143 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 NDUFA11Q86Y39 141 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 SPAG8Q99932 426 aaPredicted RBP8.18□□□□□ -1.1
LRP1-202ENST00000338962 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 MUC4Q99102 2169 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 H3BMM0 161 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 PPP1R17O96001 155 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 SUMO2P61956 95 aaKnown RBP8.18□□□□□ -1.1
LRP1-202ENST00000338962 HSD52Q0P140 79 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 RASL10AQ92737 203 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
LRP1-202ENST00000338962 C20orf78Q9BR46 151 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms