RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
PRKN-201ENST00000338468 OR10AG1Q8NH19 301 aa10.36□□□□□ -0.75
PRKN-201ENST00000338468 LYPD6BQ8NI32 183 aa10.36□□□□□ -0.75
PRKN-201ENST00000338468 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
PRKN-201ENST00000338468 LRP1BQ9NZR2 4599 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 A0A087WWL8 130 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 C19orf71A6NCJ1 209 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 SNAI2O43623 268 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 DNAH10OSP0CZ25 163 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 TNFRSF18Q9Y5U5 241 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
PRKN-201ENST00000338468 RHODO00212 210 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 CDK2AP2O75956 126 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 GNG4P50150 75 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 FAM74A4Q5TZK3 123 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 SMIM12Q96EX1 92 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 LY96Q9Y6Y9 160 aa10.34□□□□□ -0.75
PRKN-201ENST00000338468 MUC21A0A0G2JKD1 596 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 MUC21A0A140T8X8 626 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GAGE12JA6NER3 117 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 OR5AL1P0C617 328 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 TAGLN2P37802 199 aaKnown RBP10.33□□□□□ -0.76
PRKN-201ENST00000338468 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GAGE1Q13065 139 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GAGE4Q13068 117 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GAGE5Q13069 117 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 ATP6V0E2Q8NHE4 81 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 GTSF1LQ9H1H1 148 aa10.33□□□□□ -0.76
PRKN-201ENST00000338468 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
PRKN-201ENST00000338468 GZMBP10144 247 aa10.32□□□□□ -0.76
PRKN-201ENST00000338468 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
PRKN-201ENST00000338468 LELP1Q5T871 98 aa10.31□□□□□ -0.76
PRKN-201ENST00000338468 TRAV9-2A0A087WT02 112 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 IGHV3-38A0A0C4DH36 116 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 RBFOX3A6NFN3 312 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 K7EP13 123 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 EVI2AP22794 236 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 LINC01556Q5JQF7 62 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 OR2D3Q8NGH3 330 aa10.3□□□□□ -0.76
PRKN-201ENST00000338468 K7EN84 100 aa10.29□□□□□ -0.76
PRKN-201ENST00000338468 OR10J3Q5JRS4 329 aa10.29□□□□□ -0.76
PRKN-201ENST00000338468 MSRB1Q9NZV6 116 aa10.29□□□□□ -0.76
PRKN-201ENST00000338468 KIF25-AS1Q9Y6Z4 181 aa10.29□□□□□ -0.76
PRKN-201ENST00000338468 TRAV8-6A0A0B4J262 113 aa10.28□□□□□ -0.76
PRKN-201ENST00000338468 SSTP61278 116 aa10.28□□□□□ -0.76
PRKN-201ENST00000338468 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
PRKN-201ENST00000338468 Q8N3U1 123 aa10.28□□□□□ -0.76
PRKN-201ENST00000338468 OCC1Q8TAD7 63 aa10.28□□□□□ -0.76
PRKN-201ENST00000338468 DAZAP1Q96EP5 407 aaKnown RBP10.28□□□□□ -0.76
PRKN-201ENST00000338468 TRBV10-1A0A0K0K1A3 114 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 TMEM250H0YL14 139 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 P01737 135 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 KRTAP10-2P60368 255 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 RPS20P60866 119 aaKnown RBP10.27□□□□□ -0.77
PRKN-201ENST00000338468 RAB4BP61018 213 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 FER1L6-AS1Q8NA97 138 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 NUDT11Q96G61 164 aa10.27□□□□□ -0.77
PRKN-201ENST00000338468 APOBP04114 4563 aaKnown RBP10.27□□□□□ -0.77
PRKN-201ENST00000338468 IBA57-AS1B1ANH7 110 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 UBE2D3P61077 147 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 UBE2D2P62837 147 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 TOR2AQ5JU69 321 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 Q8N1X5 172 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 RNASE7Q9H1E1 156 aaKnown RBP10.26□□□□□ -0.77
PRKN-201ENST00000338468 BIN3Q9NQY0 253 aa10.26□□□□□ -0.77
PRKN-201ENST00000338468 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 IGHV3-33P01772 117 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 IGHV3-30-3P0DP02 117 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 ZNF56Q15929 161 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 NEXN-AS1Q8NBZ9 246 aa10.25□□□□□ -0.77
PRKN-201ENST00000338468 TRBV7-3A0A075B6L6 115 aa10.24□□□□□ -0.77
PRKN-201ENST00000338468 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
PRKN-201ENST00000338468 LYZL1Q6UWQ5 148 aa10.24□□□□□ -0.77
PRKN-201ENST00000338468 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
PRKN-201ENST00000338468 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
PRKN-201ENST00000338468 AP1S3Q96PC3 154 aa10.24□□□□□ -0.77
PRKN-201ENST00000338468 A0A087WWC5 75 aa10.23□□□□□ -0.77
PRKN-201ENST00000338468 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
PRKN-201ENST00000338468 F2Z2F3 143 aa10.23□□□□□ -0.77
PRKN-201ENST00000338468 NDUFS6O75380 124 aaKnown RBP10.23□□□□□ -0.77
PRKN-201ENST00000338468 CTRLP40313 264 aa10.23□□□□□ -0.77
PRKN-201ENST00000338468 RPP21Q9H633 154 aaKnown RBP10.23□□□□□ -0.77
PRKN-201ENST00000338468 A0A087WTM6 91 aa10.22□□□□□ -0.77
PRKN-201ENST00000338468 SRP19P09132 144 aaKnown RBP10.22□□□□□ -0.77
PRKN-201ENST00000338468 CEBPGP53567 150 aa10.22□□□□□ -0.77
PRKN-201ENST00000338468 CACNG7P62955 275 aa10.22□□□□□ -0.77
PRKN-201ENST00000338468 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
PRKN-201ENST00000338468 F5H697 171 aa10.21□□□□□ -0.77
PRKN-201ENST00000338468 FUSP35637 526 aaKnown RBP eCLIP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms