RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PRR31Q5SQ13 230 aa17.02■□□□□ 0.31
TSEN54-201ENST00000333213 LYZL1Q6UWQ5 148 aa17.02■□□□□ 0.31
TSEN54-201ENST00000333213 HSBP1L1C9JCN9 74 aa17.01■□□□□ 0.31
TSEN54-201ENST00000333213 ARMS2P0C7Q2 107 aa17.01■□□□□ 0.31
TSEN54-201ENST00000333213 COX11Q9Y6N1 276 aa17.01■□□□□ 0.31
TSEN54-201ENST00000333213 MUC21A0A0G2JKD1 596 aa17■□□□□ 0.31
TSEN54-201ENST00000333213 MUC21A0A140T8X8 626 aa17■□□□□ 0.31
TSEN54-201ENST00000333213 HINT1P49773 126 aaPredicted RBP17■□□□□ 0.31
TSEN54-201ENST00000333213 XCL2Q9UBD3 114 aa17■□□□□ 0.31
TSEN54-201ENST00000333213 RPL35AP18077 110 aaKnown RBP17■□□□□ 0.31
TSEN54-201ENST00000333213 FER1L6-AS1Q8NA97 138 aa17■□□□□ 0.31
TSEN54-201ENST00000333213 KRTAP10-11P60412 298 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 LINC01545Q5VT33 79 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 FAM159AQ6UWV7 190 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 PRM2P04554 102 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 SLC25A34Q6PIV7 304 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 AP5S1Q9NUS5 200 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 DNAH3Q8TD57 4116 aa16.98■□□□□ 0.31
TSEN54-201ENST00000333213 SPRY2O43597 315 aa16.97■□□□□ 0.31
TSEN54-201ENST00000333213 LINC00173Q6ZV60 143 aa16.97■□□□□ 0.31
TSEN54-201ENST00000333213 RNASE3P12724 160 aaKnown RBP16.96■□□□□ 0.31
TSEN54-201ENST00000333213 U3KQK5 164 aa16.96■□□□□ 0.31
TSEN54-201ENST00000333213 IGHV1OR15-1A0A075B7D0 117 aa16.96■□□□□ 0.3
TSEN54-201ENST00000333213 H3BVH4 76 aa16.96■□□□□ 0.3
TSEN54-201ENST00000333213 PMCHL2Q9BQD1 86 aa16.96■□□□□ 0.3
TSEN54-201ENST00000333213 SCRT2Q9NQ03 307 aa16.96■□□□□ 0.3
TSEN54-201ENST00000333213 EGFEM1PQ0D2K5 195 aa16.95■□□□□ 0.3
TSEN54-201ENST00000333213 UBE2V1Q13404 147 aa16.95■□□□□ 0.3
TSEN54-201ENST00000333213 C1orf158Q8N1D5 194 aa16.95■□□□□ 0.3
TSEN54-201ENST00000333213 OR10AG1Q8NH19 301 aa16.95■□□□□ 0.3
TSEN54-201ENST00000333213 CNFNQ9BYD5 112 aa16.95■□□□□ 0.3
TSEN54-201ENST00000333213 SNAI2O43623 268 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 CBY1Q9Y3M2 126 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 G3V4G9 280 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 INSP01308 110 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 FA2HQ7L5A8 372 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 MSRB1Q9NZV6 116 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 MDFICQ9P1T7 246 aa16.94■□□□□ 0.3
TSEN54-201ENST00000333213 ASIPP42127 132 aa16.93■□□□□ 0.3
TSEN54-201ENST00000333213 PTTG1IPP53801 180 aa16.92■□□□□ 0.3
TSEN54-201ENST00000333213 TIMM8BQ9Y5J9 83 aaPredicted RBP16.92■□□□□ 0.3
TSEN54-201ENST00000333213 IGHV3-16A0A0C4DH30 117 aa16.92■□□□□ 0.3
TSEN54-201ENST00000333213 CSNK1G2-AS1Q8NCQ2 148 aa16.92■□□□□ 0.3
TSEN54-201ENST00000333213 hDV102S1A0JD36 115 aa16.91■□□□□ 0.3
TSEN54-201ENST00000333213 HTN1P15515 57 aa16.91■□□□□ 0.3
TSEN54-201ENST00000333213 S100A4P26447 101 aaKnown RBP16.91■□□□□ 0.3
TSEN54-201ENST00000333213 PRSS3P2Q8NHM4 247 aa16.91■□□□□ 0.3
TSEN54-201ENST00000333213 LINC01587Q99440 93 aa16.9■□□□□ 0.3
TSEN54-201ENST00000333213 CCL25O15444 150 aa16.9■□□□□ 0.3
TSEN54-201ENST00000333213 FAM104BQ5XKR9 115 aa16.9■□□□□ 0.3
TSEN54-201ENST00000333213 MORN3Q6PF18 240 aaPredicted RBP16.9■□□□□ 0.3
TSEN54-201ENST00000333213 MUC4Q99102 2169 aa16.89■□□□□ 0.29
TSEN54-201ENST00000333213 CBY3A6NI87 242 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 TWIST1Q15672 202 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 BVES-AS1Q5T3Y7 98 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 SAMD5Q5TGI4 173 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 MED14OSP0DP75 135 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 MPV17L2Q567V2 206 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 ORMDL3Q8N138 153 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 C9orf85Q96MD7 179 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 CSTL1Q9H114 145 aa16.88■□□□□ 0.29
TSEN54-201ENST00000333213 DNHD1Q96M86 4753 aa16.87■□□□□ 0.29
TSEN54-201ENST00000333213 IGHV4-4A0A075B6R2 117 aa16.87■□□□□ 0.29
TSEN54-201ENST00000333213 IGHV3OR16-12A0A075B7B8 117 aa16.87■□□□□ 0.29
TSEN54-201ENST00000333213 COX8AP10176 69 aa16.87■□□□□ 0.29
TSEN54-201ENST00000333213 LINC00467Q9BRT7 94 aa16.87■□□□□ 0.29
TSEN54-201ENST00000333213 K7EP13 123 aa16.86■□□□□ 0.29
TSEN54-201ENST00000333213 AZU1P20160 251 aa16.86■□□□□ 0.29
TSEN54-201ENST00000333213 IGHV4-30-4P0DP06 118 aa16.86■□□□□ 0.29
TSEN54-201ENST00000333213 LGALS9BQ3B8N2 356 aa16.86■□□□□ 0.29
TSEN54-201ENST00000333213 LGALS9CQ6DKI2 356 aa16.86■□□□□ 0.29
TSEN54-201ENST00000333213 NUDT3O95989 172 aa16.85■□□□□ 0.29
TSEN54-201ENST00000333213 SPANXN1Q5VSR9 72 aa16.85■□□□□ 0.29
TSEN54-201ENST00000333213 PRELID3AQ96N28 172 aa16.85■□□□□ 0.29
TSEN54-201ENST00000333213 C1QTNF4Q9BXJ3 329 aa16.85■□□□□ 0.29
TSEN54-201ENST00000333213 PHLDA3Q9Y5J5 127 aa16.85■□□□□ 0.29
TSEN54-201ENST00000333213 M0R381 172 aa16.84■□□□□ 0.29
TSEN54-201ENST00000333213 TRGV11A0A075B6L2 103 aa16.84■□□□□ 0.29
TSEN54-201ENST00000333213 D6R8Y8 96 aa16.84■□□□□ 0.29
TSEN54-201ENST00000333213 C11orf72Q8NBR9 251 aa16.84■□□□□ 0.29
TSEN54-201ENST00000333213 A0A096LNJ9 63 aa16.83■□□□□ 0.28
TSEN54-201ENST00000333213 TAX1BP3O14907 124 aa16.83■□□□□ 0.28
TSEN54-201ENST00000333213 NBEAL2Q6ZNJ1 2754 aa16.83■□□□□ 0.28
TSEN54-201ENST00000333213 NOTCH1P46531 2555 aa16.83■□□□□ 0.28
TSEN54-201ENST00000333213 EVI2AP22794 236 aa16.82■□□□□ 0.28
TSEN54-201ENST00000333213 IFI27P40305 119 aaPredicted RBP16.82■□□□□ 0.28
TSEN54-201ENST00000333213 CACNG7P62955 275 aa16.82■□□□□ 0.28
TSEN54-201ENST00000333213 NBEAL1Q6ZS30 2694 aa16.82■□□□□ 0.28
TSEN54-201ENST00000333213 NXPH4O95158 308 aa16.82■□□□□ 0.28
TSEN54-201ENST00000333213 HBDP02042 147 aa16.81■□□□□ 0.28
TSEN54-201ENST00000333213 MRPL51Q4U2R6 128 aaKnown RBP16.81■□□□□ 0.28
TSEN54-201ENST00000333213 AMN1Q8IY45 258 aa16.81■□□□□ 0.28
TSEN54-201ENST00000333213 LINC01546A6NGU7 62 aa16.8■□□□□ 0.28
TSEN54-201ENST00000333213 PPBPP02775 128 aa16.8■□□□□ 0.28
TSEN54-201ENST00000333213 RNASE8Q8TDE3 154 aaKnown RBP16.8■□□□□ 0.28
TSEN54-201ENST00000333213 RIPPLY3P57055 190 aa16.79■□□□□ 0.28
TSEN54-201ENST00000333213 SEC11AP67812 179 aa16.79■□□□□ 0.28
TSEN54-201ENST00000333213 KIR2DL5BQ8NHK3 375 aa16.79■□□□□ 0.28
TSEN54-201ENST00000333213 MGAM2Q2M2H8 2515 aa16.79■□□□□ 0.28
TSEN54-201ENST00000333213 Q6ZVH6 145 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms