RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TLN1Q9Y490 2541 aaKnown RBP15.63■□□□□ 0.09
CMTM4-201ENST00000330687 IGLV4-69A0A075B6H9 119 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 G3V318 75 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 A0A0U1RRA0 63 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 CD59P13987 128 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 COX8CQ7Z4L0 72 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 YAE1D1Q9NRH1 226 aa15.63■□□□□ 0.09
CMTM4-201ENST00000330687 FAM236AA0A1B0GUQ0 79 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 FAM236BA0A1B0GV22 79 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 M0QXV9 152 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 TSHBP01222 138 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 RNASE13Q5GAN3 156 aaKnown RBP15.62■□□□□ 0.09
CMTM4-201ENST00000330687 METTL26Q96S19 204 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 DCHS2Q6V1P9 2916 aa15.62■□□□□ 0.09
CMTM4-201ENST00000330687 TRIAP1O43715 76 aa15.61■□□□□ 0.09
CMTM4-201ENST00000330687 IGKV3-20P01619 116 aa15.61■□□□□ 0.09
CMTM4-201ENST00000330687 NUP37Q8NFH4 326 aa15.61■□□□□ 0.09
CMTM4-201ENST00000330687 RS1O15537 224 aa15.6■□□□□ 0.09
CMTM4-201ENST00000330687 ZNF22P17026 224 aaPredicted RBP15.6■□□□□ 0.09
CMTM4-201ENST00000330687 SBSPONQ8IVN8 264 aa15.6■□□□□ 0.09
CMTM4-201ENST00000330687 E7EQL1 145 aa15.59■□□□□ 0.09
CMTM4-201ENST00000330687 LOC107984640A0A0U1RRK4 108 aa15.59■□□□□ 0.09
CMTM4-201ENST00000330687 TRGV11A0A075B6L2 103 aa15.59■□□□□ 0.09
CMTM4-201ENST00000330687 EIF4EBP3O60516 100 aaPredicted RBP15.59■□□□□ 0.09
CMTM4-201ENST00000330687 EEF1AKMT3Q96AZ1 226 aa15.59■□□□□ 0.09
CMTM4-201ENST00000330687 SDHAF1A6NFY7 115 aa15.58■□□□□ 0.09
CMTM4-201ENST00000330687 C9orf153Q5TBE3 101 aa15.58■□□□□ 0.09
CMTM4-201ENST00000330687 KLK5Q9Y337 293 aaPredicted RBP15.58■□□□□ 0.09
CMTM4-201ENST00000330687 A0A0J9YXV3 536 aa15.58■□□□□ 0.08
CMTM4-201ENST00000330687 CENPVL3A0A0U1RRI6 287 aa15.58■□□□□ 0.08
CMTM4-201ENST00000330687 SRSF2Q01130 221 aaKnown RBP15.58■□□□□ 0.08
CMTM4-201ENST00000330687 PAPPA-AS1Q5QFB9 102 aa15.58■□□□□ 0.08
CMTM4-201ENST00000330687 DAND5Q8N907 189 aa15.58■□□□□ 0.08
CMTM4-201ENST00000330687 VPREB3Q9UKI3 123 aa15.57■□□□□ 0.08
CMTM4-201ENST00000330687 UBE2E1P51965 193 aa15.57■□□□□ 0.08
CMTM4-201ENST00000330687 TMEM263Q8WUH6 116 aaKnown RBP15.57■□□□□ 0.08
CMTM4-201ENST00000330687 OOSP1A8MZH6 123 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 LINC00477Q96M19 166 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 KAAG1Q9UBP8 84 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 TRAV21A0A0B4J279 112 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 COX6CP09669 75 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 HTN1P15515 57 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 RPL13AP40429 203 aaKnown RBP15.56■□□□□ 0.08
CMTM4-201ENST00000330687 DUX5Q96PT3 197 aa15.56■□□□□ 0.08
CMTM4-201ENST00000330687 A0A0G2JNJ9 132 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 TRBV10-2A0A0K0K1G8 114 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 LGALS9O00182 355 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 ATP5J2P56134 94 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 ZNF672Q499Z4 452 aaPredicted RBP15.55■□□□□ 0.08
CMTM4-201ENST00000330687 TMEM190Q8WZ59 177 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 Q9UFV3 132 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 LINC00694P0DN24 101 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 A8MZ25 164 aa15.55■□□□□ 0.08
CMTM4-201ENST00000330687 CDX4O14627 284 aaPredicted RBP15.54■□□□□ 0.08
CMTM4-201ENST00000330687 CEMP1Q6PRD7 247 aaPredicted RBP15.54■□□□□ 0.08
CMTM4-201ENST00000330687 C20orf173Q96LM9 149 aa15.54■□□□□ 0.08
CMTM4-201ENST00000330687 PSMG3-AS1Q96PY0 264 aa15.54■□□□□ 0.08
CMTM4-201ENST00000330687 RNF5Q99942 180 aa15.54■□□□□ 0.08
CMTM4-201ENST00000330687 TNFRSF18Q9Y5U5 241 aa15.54■□□□□ 0.08
CMTM4-201ENST00000330687 PRRC2AP48634 2157 aaKnown RBP15.54■□□□□ 0.08
CMTM4-201ENST00000330687 ATP6V0E1O15342 81 aa15.53■□□□□ 0.08
CMTM4-201ENST00000330687 SPG11Q96JI7 2443 aa15.53■□□□□ 0.08
CMTM4-201ENST00000330687 CLPSL1A2RUU4 121 aa15.52■□□□□ 0.08
CMTM4-201ENST00000330687 LINC01560Q8TB33 94 aa15.52■□□□□ 0.08
CMTM4-201ENST00000330687 IGHV7-81A0A0B4J1V7 117 aa15.52■□□□□ 0.07
CMTM4-201ENST00000330687 H7C423 109 aa15.52■□□□□ 0.07
CMTM4-201ENST00000330687 SUMO4Q6EEV6 95 aa15.52■□□□□ 0.07
CMTM4-201ENST00000330687 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.51■□□□□ 0.07
CMTM4-201ENST00000330687 M0R2P5 195 aa15.51■□□□□ 0.07
CMTM4-201ENST00000330687 IGIPA6NJ69 53 aa15.51■□□□□ 0.07
CMTM4-201ENST00000330687 ZFAND3Q9H8U3 227 aa15.51■□□□□ 0.07
CMTM4-201ENST00000330687 VCYO14598 125 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 IGHV3-11P01762 117 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 CD3EP07766 207 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 ATRXP46100 2492 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 COL12A1Q99715 3063 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 LY6LH3BQJ8 138 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 GPHB5Q86YW7 130 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 ICOSQ9Y6W8 199 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 IGHV3-73A0A0B4J1V6 119 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 ZNF625Q96I27 306 aaPredicted RBP15.5■□□□□ 0.07
CMTM4-201ENST00000330687 PTPRQQ9UMZ3 2332 aa15.5■□□□□ 0.07
CMTM4-201ENST00000330687 DEFB124Q8NES8 71 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 UBTD1Q9HAC8 227 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 MUC6Q6W4X9 2439 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 TRAV41A0A0B4J266 112 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 RNF223E7ERA6 249 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 TMEM101Q96IK0 257 aa15.49■□□□□ 0.07
CMTM4-201ENST00000330687 C9orf47Q6ZRZ4 202 aa15.48■□□□□ 0.07
CMTM4-201ENST00000330687 VMO1Q7Z5L0 202 aa15.48■□□□□ 0.07
CMTM4-201ENST00000330687 MUC4Q99102 2169 aa15.48■□□□□ 0.07
CMTM4-201ENST00000330687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.48■□□□□ 0.07
CMTM4-201ENST00000330687 EDA2RQ9HAV5 297 aa15.48■□□□□ 0.07
CMTM4-201ENST00000330687 TMEM219Q86XT9 240 aa15.47■□□□□ 0.07
CMTM4-201ENST00000330687 ZFAND2AQ8N6M9 145 aa15.47■□□□□ 0.07
CMTM4-201ENST00000330687 CCDC140Q96MF4 163 aa15.47■□□□□ 0.07
CMTM4-201ENST00000330687 IGHV3OR16-10A0A075B7F0 116 aa15.47■□□□□ 0.07
CMTM4-201ENST00000330687 NPBQ8NG41 125 aa15.47■□□□□ 0.07
CMTM4-201ENST00000330687 A0A0J9YXY3 114 aa15.46■□□□□ 0.07
CMTM4-201ENST00000330687 IGHV4-4A0A075B6R2 117 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms