RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TP53TG1Q9Y2A0 90 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 FAM74A4Q5TZK3 123 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 Q8N9W7 124 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 TMEM190Q8WZ59 177 aa5.99□□□□□ -1.45
VMA21-201ENST00000330374 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 TRAV12-1A0A0B4J245 112 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 Q1RN00 199 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 CUBNO60494 3623 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 IGHV3-11P01762 117 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 ASIPP42127 132 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 TCTEX1D4Q5JR98 221 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 TRPT1Q86TN4 253 aaKnown RBP5.98□□□□□ -1.45
VMA21-201ENST00000330374 Q8NA96 180 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 DPH3P1Q9H4G8 78 aa5.98□□□□□ -1.45
VMA21-201ENST00000330374 ZNF256Q9Y2P7 627 aaPredicted RBP5.98□□□□□ -1.45
VMA21-201ENST00000330374 A8MWV9 139 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 ZFP36P26651 326 aaKnown RBP5.97□□□□□ -1.45
VMA21-201ENST00000330374 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 LY6G5BQ8NDX9 201 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 OPRPNQ99935 248 aaPredicted RBP5.97□□□□□ -1.45
VMA21-201ENST00000330374 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 NDUFA11Q86Y39 141 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 RBAKDNA6NC62 111 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 C9JAW5 83 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 MUC4Q99102 2169 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 TRAV2A0A0B4J234 112 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 ODF3BA8MYP8 253 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 IGKV3-20P01619 116 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 CRIP2P52943 208 aaPredicted RBP5.97□□□□□ -1.45
VMA21-201ENST00000330374 OR10J6PQ8NGY7 276 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 NACAE9PAV3 2078 aa5.97□□□□□ -1.45
VMA21-201ENST00000330374 TRBV12-3P01733 135 aa5.96□□□□□ -1.45
VMA21-201ENST00000330374 EEF1AKMT3Q96AZ1 226 aa5.96□□□□□ -1.45
VMA21-201ENST00000330374 MUC6Q6W4X9 2439 aa5.96□□□□□ -1.45
VMA21-201ENST00000330374 IGHV4-39P01824 125 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CFC1BP0CG36 223 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CFC1P0CG37 223 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 HERVK_113P61574 105 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 UNQ9165/PRO28630Q6UXU0 137 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 TEN1Q86WV5 123 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 TRBV20-1A0A075B6N2 111 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 A0A0J9YY99 117 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 UBE2D1P51668 147 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 Q96MF0 132 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CCL21O00585 134 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CRYGDP07320 174 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CD7P09564 240 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 CD164L2Q6UWJ8 174 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 C9orf47Q6ZRZ4 202 aa5.96□□□□□ -1.46
VMA21-201ENST00000330374 C2CD3Q4AC94 2353 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 TRAV21A0A0B4J279 112 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 CDSNQ15517 529 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 DUX5Q96PT3 197 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 SAA4P35542 130 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 M0R1W7 72 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 PRYO14603 147 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 TSHBP01222 138 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 ZNF688P0C7X2 276 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
VMA21-201ENST00000330374 Q8N6K4 173 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 ZFAND2AQ8N6M9 145 aa5.95□□□□□ -1.46
VMA21-201ENST00000330374 COX6B1P14854 86 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 NPC2P61916 151 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 CFHR3Q02985 330 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 AVPP01185 164 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 UBE2D3P61077 147 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 UBE2D2P62837 147 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 LYRM7Q5U5X0 104 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 TEX29Q8N6K0 151 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 IGLV4-69A0A075B6H9 119 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 SLC25A20O43772 301 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 ZNF415Q09FC8 603 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 ZFAND6Q6FIF0 208 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 ZNRF2Q8NHG8 242 aa5.94□□□□□ -1.46
VMA21-201ENST00000330374 NCOR2Q9Y618 2525 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 PRSS2P07478 247 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 C10orf126Q8N4M7 172 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 ATP6V0E2Q8NHE4 81 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 ZNF580Q9UK33 172 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 IGHV4-4A0A075B6R2 117 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 J3QQQ9 107 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 IGHV3-30P01768 117 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 IGHV3-30-5P0DP03 117 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 PMVKQ15126 192 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 LY6EQ16553 131 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
VMA21-201ENST00000330374 TRAV12-3A0A0B4J271 114 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 SDHAF1A6NFY7 115 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 RNASE3P12724 160 aaKnown RBP5.93□□□□□ -1.46
VMA21-201ENST00000330374 TCF15Q12870 199 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 GPHB5Q86YW7 130 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 LINC00477Q96M19 166 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 HIVEP3Q5T1R4 2406 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 ZNF56Q15929 161 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 SUMO4Q6EEV6 95 aa5.93□□□□□ -1.46
VMA21-201ENST00000330374 ELANEP08246 267 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms