RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 LYPD6Q86Y78 171 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 VWCEQ96DN2 955 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 SAA4P35542 130 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 IGKV1D-17A0A075B6S4 117 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 A0A0G2JNJ9 132 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
COL12A1-201ENST00000322507 Q9UFV3 132 aa7.72□□□□□ -1.17
COL12A1-201ENST00000322507 LOXL1Q08397 574 aaPredicted RBP7.71□□□□□ -1.17
COL12A1-201ENST00000322507 F8WDY8 70 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 SMKR1H3BMG3 65 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 WISP1O95388 367 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 MSMBP08118 114 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.71□□□□□ -1.18
COL12A1-201ENST00000322507 C11orf52Q96A22 123 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 LINC00526Q96FQ7 95 aa7.71□□□□□ -1.18
COL12A1-201ENST00000322507 IGHV1-69DA0A0B4J2H0 117 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 ZNF134P52741 427 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 UBE2D2P62837 147 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 Q8N1Y9 231 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 LTAP01374 205 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 CLPSP04118 112 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 V9GYV3 84 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
COL12A1-201ENST00000322507 ARMS2P0C7Q2 107 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 DAND5Q8N907 189 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 MIFP14174 115 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 B3GALT5-AS1P59052 145 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 ZNF747Q9BV97 191 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 DEFB112Q30KQ8 113 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 PCP2Q8IVA1 136 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 DIAPH2-AS1Q14236 149 aa7.69□□□□□ -1.18
COL12A1-201ENST00000322507 TMEM105Q8N8V8 129 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 K7EM74 188 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 SPAG11BQ08648 103 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 Q8N976 141 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 TRBV10-3A0A0K0K1G6 114 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 TEX49A0A1B0GTD5 131 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 H3BRN7 92 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 PRR25Q96S07 402 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 IGKV1-16P04430 117 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 C5orf63A6NC05 138 aa7.68□□□□□ -1.18
COL12A1-201ENST00000322507 PAX9P55771 341 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 FGFBP3Q8TAT2 258 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 TRAV26-2A0A0B4J265 109 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 LOC107984640A0A0U1RRK4 108 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
COL12A1-201ENST00000322507 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 IGHV1-69P01742 117 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 CD24P25063 80 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 PIK3CD-AS1Q5SR53 167 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 PINLYPA6NC86 204 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 MRPL36Q9P0J6 103 aaKnown RBP7.67□□□□□ -1.18
COL12A1-201ENST00000322507 EFNA2O43921 213 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 Q8TAT8 98 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 Q9H8V8 135 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 NDUFA11Q86Y39 141 aa7.67□□□□□ -1.18
COL12A1-201ENST00000322507 FXYD2P54710 66 aa7.66□□□□□ -1.18
COL12A1-201ENST00000322507 Q8N9L7 120 aa7.66□□□□□ -1.18
COL12A1-201ENST00000322507 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
COL12A1-201ENST00000322507 WI2-2373I1.2A0A1W2PRP0 233 aa7.66□□□□□ -1.18
COL12A1-201ENST00000322507 WFDC10AQ9H1F0 79 aa7.66□□□□□ -1.18
COL12A1-201ENST00000322507 C10orf55Q5SWW7 151 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 IGHV4-28A0A0C4DH34 117 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 ZMAT4Q9H898 229 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 C17orf77Q96MU5 243 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 C5orf38Q86SI9 138 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 A0A087WWL8 130 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 DAZ2Q13117 558 aaKnown RBP7.65□□□□□ -1.18
COL12A1-201ENST00000322507 ENHOQ6UWT2 76 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 DAZ4Q86SG3 579 aaKnown RBP7.65□□□□□ -1.18
COL12A1-201ENST00000322507 RNF185Q96GF1 192 aa7.65□□□□□ -1.18
COL12A1-201ENST00000322507 DAZ3Q9NR90 486 aaKnown RBP7.65□□□□□ -1.18
COL12A1-201ENST00000322507 H0Y9J4 135 aa7.65□□□□□ -1.19
COL12A1-201ENST00000322507 NDPQ00604 133 aa7.65□□□□□ -1.19
COL12A1-201ENST00000322507 CRYGDP07320 174 aa7.65□□□□□ -1.19
COL12A1-201ENST00000322507 CD164Q04900 197 aa7.65□□□□□ -1.19
COL12A1-201ENST00000322507 TLN2Q9Y4G6 2542 aa7.65□□□□□ -1.19
COL12A1-201ENST00000322507 OVOL3O00110 214 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 LTBP2Q14767 1821 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 VWC2Q2TAL6 325 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 TLN1Q9Y490 2541 aaKnown RBP7.64□□□□□ -1.19
COL12A1-201ENST00000322507 IGHV3-73A0A0B4J1V6 119 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 ATP6V0E1O15342 81 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 IGLV1-44P01699 117 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 BPESC1Q9GZL8 116 aa7.64□□□□□ -1.19
COL12A1-201ENST00000322507 PRR31Q5SQ13 230 aa7.63□□□□□ -1.19
COL12A1-201ENST00000322507 Q0VFX4 171 aa7.63□□□□□ -1.19
COL12A1-201ENST00000322507 IGLV3-9A0A075B6K5 115 aa7.63□□□□□ -1.19
COL12A1-201ENST00000322507 DEFB105AQ8NG35 78 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms