RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 TRBV6-8A0A0A6YYG3 113 aa12.44□□□□□ -0.42
SSNA1-201ENST00000322310 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
SSNA1-201ENST00000322310 RPL36AP83881 106 aaKnown RBP12.44□□□□□ -0.42
SSNA1-201ENST00000322310 CIRBPQ14011 172 aaKnown RBP12.44□□□□□ -0.42
SSNA1-201ENST00000322310 SAPCD1Q5SSQ6 148 aa12.44□□□□□ -0.42
SSNA1-201ENST00000322310 OR11H4Q8NGC9 324 aa12.44□□□□□ -0.42
SSNA1-201ENST00000322310 PPP1R1CQ8WVI7 109 aa12.44□□□□□ -0.42
SSNA1-201ENST00000322310 RPL36ALQ969Q0 106 aaKnown RBP12.44□□□□□ -0.42
SSNA1-201ENST00000322310 TRBV7-3A0A075B6L6 115 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 TRAV34A0A0B4J273 112 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 B4DEV8 164 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 MIAQ16674 131 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
SSNA1-201ENST00000322310 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 GRIFINA4D1Z8 144 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 M0R036 132 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 CDC34P49427 236 aaPredicted RBP12.42□□□□□ -0.42
SSNA1-201ENST00000322310 KRTAP26-1Q6PEX3 210 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 ARL2-SNX15V9GYD0 113 aa12.42□□□□□ -0.42
SSNA1-201ENST00000322310 A0A087WYN8 130 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 M0R381 172 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 STAG3L2P0CL84 134 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 STAG3L3P0CL85 134 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 GCHFRP30047 84 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
SSNA1-201ENST00000322310 H2BFSP57053 126 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 CYCSP99999 105 aaKnown RBP12.41□□□□□ -0.42
SSNA1-201ENST00000322310 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
SSNA1-201ENST00000322310 KRBOX1C9JBD0 128 aa12.4□□□□□ -0.42
SSNA1-201ENST00000322310 PHOX2AO14813 284 aa12.4□□□□□ -0.42
SSNA1-201ENST00000322310 PTTG1O95997 202 aa12.4□□□□□ -0.42
SSNA1-201ENST00000322310 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
SSNA1-201ENST00000322310 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
SSNA1-201ENST00000322310 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
SSNA1-201ENST00000322310 MPC2O95563 127 aa12.39□□□□□ -0.43
SSNA1-201ENST00000322310 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
SSNA1-201ENST00000322310 CRIP1P50238 77 aa12.38□□□□□ -0.43
SSNA1-201ENST00000322310 CNBPP62633 177 aaKnown RBP12.38□□□□□ -0.43
SSNA1-201ENST00000322310 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
SSNA1-201ENST00000322310 OR10G8Q8NGN5 311 aa12.38□□□□□ -0.43
SSNA1-201ENST00000322310 PRR34Q9NV39 138 aa12.38□□□□□ -0.43
SSNA1-201ENST00000322310 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
SSNA1-201ENST00000322310 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
SSNA1-201ENST00000322310 SPACA4Q8TDM5 124 aa12.37□□□□□ -0.43
SSNA1-201ENST00000322310 KIF25-AS1Q9Y6Z4 181 aa12.37□□□□□ -0.43
SSNA1-201ENST00000322310 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
SSNA1-201ENST00000322310 hDV102S1A0JD36 115 aa12.36□□□□□ -0.43
SSNA1-201ENST00000322310 TPT1P13693 172 aaKnown RBP12.36□□□□□ -0.43
SSNA1-201ENST00000322310 MZT2BQ6NZ67 158 aa12.36□□□□□ -0.43
SSNA1-201ENST00000322310 CLRN3Q8NCR9 226 aa12.36□□□□□ -0.43
SSNA1-201ENST00000322310 RNF185Q96GF1 192 aa12.36□□□□□ -0.43
SSNA1-201ENST00000322310 IGLV10-54A0A075B6I4 117 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 IGHV3-64A0A075B6Q5 118 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 SH2D1AO60880 128 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 SLPIP03973 132 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 RBX1P62877 108 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 Q86TA4 180 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 CCDC32Q9BV29 185 aa12.35□□□□□ -0.43
SSNA1-201ENST00000322310 PET100P0DJ07 73 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 GAGE6Q13070 117 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 NTM-AS1Q6ZSK4 140 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 ZFP82Q8N141 532 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 TMEM167BQ9NRX6 74 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 PLAC8Q9NZF1 115 aa12.34□□□□□ -0.43
SSNA1-201ENST00000322310 PKIAP61925 76 aa12.33□□□□□ -0.44
SSNA1-201ENST00000322310 C7orf33Q8WU49 177 aa12.33□□□□□ -0.44
SSNA1-201ENST00000322310 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
SSNA1-201ENST00000322310 CXorf1O96002 111 aa12.32□□□□□ -0.44
SSNA1-201ENST00000322310 IFNA7P01567 189 aa12.32□□□□□ -0.44
SSNA1-201ENST00000322310 ZNF56Q15929 161 aa12.32□□□□□ -0.44
SSNA1-201ENST00000322310 RAB4BP61018 213 aa12.31□□□□□ -0.44
SSNA1-201ENST00000322310 PRR27Q6MZM9 219 aa12.31□□□□□ -0.44
SSNA1-201ENST00000322310 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
SSNA1-201ENST00000322310 ENKURQ8TC29 256 aa12.31□□□□□ -0.44
SSNA1-201ENST00000322310 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.3□□□□□ -0.44
SSNA1-201ENST00000322310 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 PEX7O00628 323 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 KRTAP10-8P60410 259 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 PRR3P79522 188 aaKnown RBP12.3□□□□□ -0.44
SSNA1-201ENST00000322310 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 GTSF1Q8WW33 167 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 AP5S1Q9NUS5 200 aa12.3□□□□□ -0.44
SSNA1-201ENST00000322310 UBE2G2P60604 165 aa12.29□□□□□ -0.44
SSNA1-201ENST00000322310 REG3AQ06141 175 aa12.29□□□□□ -0.44
SSNA1-201ENST00000322310 LINC01559Q495D7 138 aa12.29□□□□□ -0.44
SSNA1-201ENST00000322310 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.29□□□□□ -0.44
SSNA1-201ENST00000322310 LPAP08519 4548 aa12.28□□□□□ -0.44
SSNA1-201ENST00000322310 DERL1Q9BUN8 251 aa12.28□□□□□ -0.44
SSNA1-201ENST00000322310 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
SSNA1-201ENST00000322310 RAB5CP51148 216 aa12.27□□□□□ -0.45
SSNA1-201ENST00000322310 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
SSNA1-201ENST00000322310 PSMG3Q9BT73 122 aaPredicted RBP12.27□□□□□ -0.45
SSNA1-201ENST00000322310 ACTR3CQ9C0K3 210 aaPredicted RBP12.27□□□□□ -0.45
SSNA1-201ENST00000322310 VAX2Q9UIW0 290 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms