RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SMCO4Q9NRQ5 59 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 RPH3ALQ9UNE2 315 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 AGRNO00468 2067 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 NF1P21359 2839 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 RYR2Q92736 4967 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 IGKV3-7A0A075B6H7 116 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV4-28A0A0C4DH34 117 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 A0A1B0GXF2 115 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 F6UB75 175 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 RNASE3P12724 160 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 SRIP30626 198 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 CRIP1P50238 77 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 RHOHQ15669 191 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 PRR9Q5T870 116 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 UFSP1Q6NVU6 142 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 PGLYRP4Q96LB8 373 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 PACRGQ96M98 296 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 XCL2Q9UBD3 114 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 PHLDA3Q9Y5J5 127 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV8-1A0A0A6YYK1 113 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 H3BTX0 84 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 M0R2Z0 102 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 LINC00694P0DN24 101 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 ZNF80P51504 273 aaPredicted RBP2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 HBBP68871 147 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 PRR27Q6MZM9 219 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 SBSPONQ8IVN8 264 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 Q8TAT8 98 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 C20orf78Q9BR46 151 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 SORL1Q92673 2214 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-53P01767 116 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1A1P0DJD3 496 aaKnown RBP2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1CP0DJD4 496 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 SMIM17P0DL12 118 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 GATA1P15976 413 aaPredicted RBP2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 ADCYAP1P18509 176 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 DAD1P61803 113 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 DEFA6Q01524 100 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 RBMY1FQ15415 496 aaKnown RBP2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 RNF212Q495C1 297 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 PRADC1Q9BSG0 188 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 DERL1Q9BUN8 251 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 GTSF1LQ9H1H1 148 aa2.34□□□□□ -2.03
SCAMP1-201ENST00000320280 C9JQL5 133 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 AKR1D1P51857 326 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 DEFB135Q30KP9 77 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 C11orf45Q8TAV5 145 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 UPK3BQ9BT76 320 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 PRO0255Q9UI72 69 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 FAT2Q9NYQ8 4349 aa2.34□□□□□ -2.04
SCAMP1-201ENST00000320280 C7orf77A4D0Y5 90 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 LINC01546A6NGU7 62 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 ARMS2P0C7Q2 107 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 AZU1P20160 251 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 SPANXN1Q5VSR9 72 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 DAZ4Q86SG3 579 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 PCNPQ8WW12 178 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 WFDC10AQ9H1F0 79 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 DAZ3Q9NR90 486 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 A0A1B0GV50 99 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 CCL25O15444 150 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 CRYBA4P53673 196 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 DEFB121Q5J5C9 76 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 ZNF575Q86XF7 245 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 NHLRC2Q8NBF2 726 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 LINC00479Q96M42 142 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 YPEL4Q96NS1 127 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 KIF25-AS1Q9Y6Z4 181 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 FBN1P35555 2871 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 HIGD1CA8MV81 97 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 K7EQD1 137 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 M0R036 132 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 RAB5BP61020 215 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 MRPL23Q16540 153 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 CFAP126Q5VTH2 177 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 NUP35Q8NFH5 326 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 OR4C5Q8NGB2 326 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 ICOSQ9Y6W8 199 aa2.33□□□□□ -2.04
SCAMP1-201ENST00000320280 TRAV12-2A0A075B6T6 113 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 RAB4AP20338 218 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 ZNF876PQ49A33 203 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 FAM222AQ5U5X8 452 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 FAM104BQ5XKR9 115 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 CEMP1Q6PRD7 247 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 LYZL1Q6UWQ5 148 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 H3BVH4 76 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 PMCHP20382 165 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 RPL36AP83881 106 aaKnown RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 GTSF1Q8WW33 167 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 RPL36ALQ969Q0 106 aaKnown RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 TMEM18Q96B42 140 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 IGKV3-20P01619 116 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 CRYGDP07320 174 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 P0DMU3 169 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 FAM231AP0DMU4 169 aa2.32□□□□□ -2.04
SCAMP1-201ENST00000320280 FAM231CP0DMU5 169 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms