RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 MSRB1Q9NZV6 116 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 NDUFA11Q86Y39 141 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
USF3-201ENST00000316407 A0A0G2JNJ9 132 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 UQCRQO14949 82 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 Q9UFV3 132 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 CFPP27918 469 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 GATA4P43694 442 aa6.86□□□□□ -1.31
USF3-201ENST00000316407 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 ODF1Q14990 250 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 SCXQ7RTU7 201 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
USF3-201ENST00000316407 RBX1P62877 108 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
USF3-201ENST00000316407 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 IGKV2D-24A0A075B6R9 120 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 GTSF1Q8WW33 167 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 SP7Q8TDD2 431 aaPredicted RBP6.85□□□□□ -1.31
USF3-201ENST00000316407 IGLV2-23P01705 113 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
USF3-201ENST00000316407 IGKV1OR2-108A0A075B7D4 117 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 BPESC1Q9GZL8 116 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 IGLV3-12A0A075B6K2 115 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 TRBV10-2A0A0K0K1G8 114 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 FAM240AA0A1B0GVK7 77 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 C9orf47Q6ZRZ4 202 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 C1orf147Q96MC9 270 aaPredicted RBP6.84□□□□□ -1.31
USF3-201ENST00000316407 NDUFA7O95182 113 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 RNF5Q99942 180 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 PLA2G2EQ9NZK7 142 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 Q8N1Y9 231 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 CSRP2Q16527 193 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 H0Y9J4 135 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 FANCD2OSQ96PS1 177 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 M0QXV9 152 aa6.84□□□□□ -1.31
USF3-201ENST00000316407 ATP5G1P05496 136 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 UBE2E1P51965 193 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 BUB3O43684 328 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 LINC00694P0DN24 101 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 HIGD2BQ4VC39 106 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 SETD2Q9BYW2 2564 aaPredicted RBP6.83□□□□□ -1.32
USF3-201ENST00000316407 ETDCA0A1B0GVM5 59 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 ADAMTS20P59510 1910 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 HIGD1BQ9P298 99 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 SEC61GP60059 68 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 DKK4Q9UBT3 224 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 NDUFC2-KCTD14E9PQ53 114 aa6.83□□□□□ -1.32
USF3-201ENST00000316407 ZFP36L1Q07352 338 aaKnown RBP6.82□□□□□ -1.32
USF3-201ENST00000316407 HIVEP3Q5T1R4 2406 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 CACNA1AO00555 2505 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 ZNF503-AS2A6NEH8 195 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 IGHV4-59P01825 116 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 PRR30Q53SZ7 412 aaPredicted RBP6.82□□□□□ -1.32
USF3-201ENST00000316407 IGLV3-9A0A075B6K5 115 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 A6NED7 52 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 LINC01619G3V211 115 aa6.82□□□□□ -1.32
USF3-201ENST00000316407 B3GALT5-AS1P59052 145 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 TLN2Q9Y4G6 2542 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 PRR4Q16378 134 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 PLA2G5P39877 138 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 TOMM6Q96B49 74 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 IGHV7-4-1A0A0J9YVY3 117 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 TIMM17BO60830 172 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 ZNF462Q96JM2 2506 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 Q71RC1 249 aaPredicted RBP6.81□□□□□ -1.32
USF3-201ENST00000316407 RITA1Q96K30 269 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 LRCOL1A6NCL2 159 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 PIK3CD-AS1Q5SR53 167 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 WFDC10BQ8IUB3 73 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 ZNF491Q8N8L2 437 aa6.81□□□□□ -1.32
USF3-201ENST00000316407 FAM110DQ8TAY7 271 aaPredicted RBP6.81□□□□□ -1.32
USF3-201ENST00000316407 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
USF3-201ENST00000316407 DAZ4Q86SG3 579 aaKnown RBP6.81□□□□□ -1.32
USF3-201ENST00000316407 DAZ3Q9NR90 486 aaKnown RBP6.81□□□□□ -1.32
USF3-201ENST00000316407 PIEZO2Q9H5I5 2752 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 SRCAPQ6ZRS2 3230 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 NDUFB1O75438 58 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 OOSP1A8MZH6 123 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 C1orf195Q5TG92 126 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 APRG1Q8IVJ8 170 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 VWCEQ96DN2 955 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 TIRAPP58753 221 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 LINC00643Q86TS7 51 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 ESM1Q9NQ30 184 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 H0YGX0 51 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 GYPEP15421 78 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 B4DSR2 109 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
USF3-201ENST00000316407 SLPIP03973 132 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
USF3-201ENST00000316407 NPBQ8NG41 125 aa6.8□□□□□ -1.32
USF3-201ENST00000316407 ZNF503Q96F45 646 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms