RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 RBMY1EA6NEQ0 496 aaKnown RBP14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 RBMY1DP0C7P1 496 aaKnown RBP14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 RBMY1A1P0DJD3 496 aaKnown RBP14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 RBMY1CP0DJD4 496 aa14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 BLCAPP62952 87 aa14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 SETD2Q9BYW2 2564 aaPredicted RBP14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
SLC12A4-201ENST00000316341 TOMM6Q96B49 74 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 MRPL53Q96EL3 112 aaKnown RBP14□□□□□ -0.17
SLC12A4-201ENST00000316341 LENEPQ9Y5L5 61 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 MYO18BQ8IUG5 2567 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 NCOR2Q9Y618 2525 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 HIST1H4AP62805 103 aaKnown RBP14□□□□□ -0.17
SLC12A4-201ENST00000316341 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 EDA2RQ9HAV5 297 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 B4DSR2 109 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 CRYGBP07316 175 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 CCDC168Q8NDH2 2452 aa14□□□□□ -0.17
SLC12A4-201ENST00000316341 TRAV12-1A0A0B4J245 112 aa13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 RS1O15537 224 aa13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 IGKV2-29A2NJV5 120 aaPredicted RBP13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 TRBV12-3P01733 135 aa13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 SPANXB1Q9NS25 103 aaPredicted RBP13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 RNF185Q96GF1 192 aa13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 TET2Q6N021 2002 aaPredicted RBP13.99□□□□□ -0.17
SLC12A4-201ENST00000316341 C9orf47Q6ZRZ4 202 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 CFHR3Q02985 330 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 C16orf54Q6UWD8 224 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 DAND5Q8N907 189 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE12JA6NER3 117 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE4Q13068 117 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE5Q13069 117 aa13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 ZNF48Q96MX3 618 aaPredicted RBP13.98□□□□□ -0.17
SLC12A4-201ENST00000316341 TM2D2Q9BX73 214 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 LEPROTO15243 131 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 TCTEX1D4Q5JR98 221 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE7O76087 117 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE12FP0CL80 117 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE12GP0CL81 117 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 GAGE12IP0CL82 117 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 AJUBAQ96IF1 538 aa13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 SONP18583 2426 aaKnown RBP13.97□□□□□ -0.17
SLC12A4-201ENST00000316341 HTN3P15516 51 aa13.96□□□□□ -0.17
SLC12A4-201ENST00000316341 MSMBP08118 114 aa13.96□□□□□ -0.17
SLC12A4-201ENST00000316341 SMAD5-AS1Q9Y6J3 95 aa13.96□□□□□ -0.17
SLC12A4-201ENST00000316341 CHD9Q3L8U1 2897 aa13.96□□□□□ -0.17
SLC12A4-201ENST00000316341 C9orf153Q5TBE3 101 aa13.96□□□□□ -0.18
SLC12A4-201ENST00000316341 MT-ATP8P03928 68 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 CRYBA4P53673 196 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 TLN2Q9Y4G6 2542 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 RPL35AP18077 110 aaKnown RBP13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 GAGE6Q13070 117 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 CCDC140Q96MF4 163 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 COL5A1P20908 1838 aaPredicted RBP13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 TCL1BO95988 128 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 INSP01308 110 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 PFN2P35080 140 aa13.95□□□□□ -0.18
SLC12A4-201ENST00000316341 C3orf56Q8N813 242 aa13.94□□□□□ -0.18
SLC12A4-201ENST00000316341 U3KQK5 164 aa13.94□□□□□ -0.18
SLC12A4-201ENST00000316341 CFAP161Q6P656 301 aa13.94□□□□□ -0.18
SLC12A4-201ENST00000316341 INSL3P51460 131 aa13.94□□□□□ -0.18
SLC12A4-201ENST00000316341 NDUFA11Q86Y39 141 aa13.94□□□□□ -0.18
SLC12A4-201ENST00000316341 PRSS47A8MTI9 375 aa13.93□□□□□ -0.18
SLC12A4-201ENST00000316341 IGHV4-38-2P0DP08 117 aa13.93□□□□□ -0.18
SLC12A4-201ENST00000316341 LINC01620Q4KN68 170 aa13.93□□□□□ -0.18
SLC12A4-201ENST00000316341 C6orf226Q5I0X4 101 aa13.93□□□□□ -0.18
SLC12A4-201ENST00000316341 Q6ZQT7 251 aa13.92□□□□□ -0.18
SLC12A4-201ENST00000316341 Q8N1Y9 231 aa13.92□□□□□ -0.18
SLC12A4-201ENST00000316341 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
SLC12A4-201ENST00000316341 C11orf21Q9P2W6 132 aa13.92□□□□□ -0.18
SLC12A4-201ENST00000316341 MDFICQ9P1T7 246 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 RHOHQ15669 191 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 TMEM86BQ8N661 226 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 MALP21145 153 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 Q8NA96 180 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 DEFB136Q30KP8 78 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 Q9H8V8 135 aa13.91□□□□□ -0.18
SLC12A4-201ENST00000316341 CEMP1Q6PRD7 247 aaPredicted RBP13.9□□□□□ -0.18
SLC12A4-201ENST00000316341 ANKRD11Q6UB99 2663 aaPredicted RBP13.9□□□□□ -0.18
SLC12A4-201ENST00000316341 PF4P02776 101 aa13.9□□□□□ -0.18
SLC12A4-201ENST00000316341 ABCA2Q9BZC7 2435 aa13.9□□□□□ -0.18
SLC12A4-201ENST00000316341 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
SLC12A4-201ENST00000316341 SMIM20Q8N5G0 67 aa13.9□□□□□ -0.19
SLC12A4-201ENST00000316341 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 USP9YO00507 2555 aaPredicted RBP13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 RHODO00212 210 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 IGHV4-59P01825 116 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 Q6ZUT4 128 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 CLEC2BQ92478 149 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 RNF183Q96D59 192 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
SLC12A4-201ENST00000316341 NEXN-AS1Q8NBZ9 246 aa13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 USP9XQ93008 2570 aaPredicted RBP13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 A0A096LNJ9 63 aa13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 DEFB130BP0DP73 79 aa13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 DEFB130AP0DP74 79 aa13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 UFSP1Q6NVU6 142 aa13.88□□□□□ -0.19
SLC12A4-201ENST00000316341 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms