RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SVIPQ8NHG7 77 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 GATA3P23771 443 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 TMEM95Q3KNT9 176 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 CLEC19AQ6UXS0 136 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 TOMM6Q96B49 74 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 PLEKHB2Q96CS7 222 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 CDIP1Q9H305 208 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 HECTD1Q9ULT8 2610 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 IGHV4-4A0A075B6R2 117 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 TRAV41A0A0B4J266 112 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 J3KRW8 73 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 C8orf86Q6ZUL3 223 aa12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
SCAMP4-201ENST00000316097 CUBNO60494 3623 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 SUMO2P61956 95 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 SRSF9Q13242 221 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 BAALCQ8WXS3 180 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 GEMIN7Q9H840 131 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 TMEM238LA0A1B0GVL6 79 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 CLPSL1A2RUU4 121 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 A6NJY4 79 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 M0R381 172 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 ZFP2Q6ZN57 461 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 GLMPQ8WWB7 406 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 PTH2Q96A98 100 aa12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 RPL39LQ96EH5 51 aaKnown RBP12.98□□□□□ -0.33
SCAMP4-201ENST00000316097 TSPAN13O95857 204 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 CCDC140Q96MF4 163 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 FHL3Q13643 280 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 PRR9Q5T870 116 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 RASL10AQ92737 203 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 DUX5Q96PT3 197 aa12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 FLNAP21333 2647 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-201ENST00000316097 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.33
SCAMP4-201ENST00000316097 C2orf66Q6UXQ4 117 aa12.96□□□□□ -0.33
SCAMP4-201ENST00000316097 LRRC75A-AS1Q8N1F1 130 aa12.96□□□□□ -0.33
SCAMP4-201ENST00000316097 UNC79Q9P2D8 2635 aa12.96□□□□□ -0.33
SCAMP4-201ENST00000316097 MT-ATP8P03928 68 aa12.96□□□□□ -0.33
SCAMP4-201ENST00000316097 UBE2D1P51668 147 aa12.96□□□□□ -0.34
SCAMP4-201ENST00000316097 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.34
SCAMP4-201ENST00000316097 ACANP16112 2415 aa12.95□□□□□ -0.34
SCAMP4-201ENST00000316097 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
SCAMP4-201ENST00000316097 IGF1P05019 195 aa12.95□□□□□ -0.34
SCAMP4-201ENST00000316097 CRYBA4P53673 196 aa12.95□□□□□ -0.34
SCAMP4-201ENST00000316097 C14orf178Q8N769 122 aaPredicted RBP12.95□□□□□ -0.34
SCAMP4-201ENST00000316097 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 MGPP08493 103 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 IGHG2P01859 326 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 C10orf99Q6UWK7 81 aa12.94□□□□□ -0.34
SCAMP4-201ENST00000316097 XGP55808 180 aa12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 METTL26Q96S19 204 aa12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 J3QLI3 93 aa12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 Q6ZUT4 128 aa12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 MRPL53Q96EL3 112 aaKnown RBP12.93□□□□□ -0.34
SCAMP4-201ENST00000316097 EMP1P54849 157 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 UBE2D3P61077 147 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 UBE2D2P62837 147 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 C16orf92Q96LL3 132 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 DPH3P1Q9H4G8 78 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 CD7P09564 240 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
SCAMP4-201ENST00000316097 PF4V1P10720 104 aa12.91□□□□□ -0.34
SCAMP4-201ENST00000316097 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
SCAMP4-201ENST00000316097 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 TCL1BO95988 128 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 PPDPFLQ8WWR9 84 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 EEF1AKMT3Q96AZ1 226 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 PHLDA3Q9Y5J5 127 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 TEN1Q86WV5 123 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 NDUFA11Q86Y39 141 aa12.9□□□□□ -0.34
SCAMP4-201ENST00000316097 NOTCH2Q04721 2471 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 C11orf86A6NJI1 115 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 LYRM7Q5U5X0 104 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 C20orf173Q96LM9 149 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 AKAP9Q99996 3911 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 FSHBP01225 129 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 CRYGDP07320 174 aa12.89□□□□□ -0.35
SCAMP4-201ENST00000316097 A0A0J9YY99 117 aa12.88□□□□□ -0.35
SCAMP4-201ENST00000316097 ASIPP42127 132 aa12.88□□□□□ -0.35
SCAMP4-201ENST00000316097 DEFB1P60022 68 aa12.88□□□□□ -0.35
SCAMP4-201ENST00000316097 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
SCAMP4-201ENST00000316097 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
SCAMP4-201ENST00000316097 CRIP2P52943 208 aaPredicted RBP12.87□□□□□ -0.35
SCAMP4-201ENST00000316097 TRBV7-1A0A0A6YYK4 115 aa12.87□□□□□ -0.35
SCAMP4-201ENST00000316097 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
SCAMP4-201ENST00000316097 Q6YL49 198 aa12.87□□□□□ -0.35
SCAMP4-201ENST00000316097 ZFAND2AQ8N6M9 145 aa12.87□□□□□ -0.35
SCAMP4-201ENST00000316097 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 HERVK_113P61574 105 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 NF1P21359 2839 aa12.86□□□□□ -0.35
SCAMP4-201ENST00000316097 A8MWV9 139 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms