RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 IGHV3-38A0A0C4DH36 116 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 LRCOL1A6NCL2 159 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 TEX46H3BTG2 121 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 SFTA3P0C7M3 94 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 WFDC10BQ8IUB3 73 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 FRZBQ92765 325 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 MAP1LC3B2A6NCE7 125 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 FAM162BQ5T6X4 162 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 MAP1LC3BQ9GZQ8 125 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 PKHD1P08F94 4074 aa5.66□□□□□ -1.5
MSL3-201ENST00000312196 TRAV1-1A0A0B4J248 108 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 ATP6V1G1O75348 118 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 IFNA7P01567 189 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 XGP55808 180 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 ELOBQ15370 118 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 TMEM97Q5BJF2 176 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 RMI2Q96E14 147 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 SMIM12Q96EX1 92 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 ABCA13Q86UQ4 5058 aa5.65□□□□□ -1.5
MSL3-201ENST00000312196 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.51
MSL3-201ENST00000312196 H0Y8G0 127 aa5.65□□□□□ -1.51
MSL3-201ENST00000312196 HMGB3O15347 200 aaKnown RBP5.65□□□□□ -1.51
MSL3-201ENST00000312196 ZFP82Q8N141 532 aa5.65□□□□□ -1.51
MSL3-201ENST00000312196 C1orf43Q9BWL3 253 aa5.65□□□□□ -1.51
MSL3-201ENST00000312196 B4DEV8 164 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 SH2D1AO60880 128 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 GCSHP23434 173 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 CRIP1P50238 77 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 RAB5CP51148 216 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 ATRAIDQ6UW56 229 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 SSBP4Q9BWG4 385 aaPredicted RBP5.64□□□□□ -1.51
MSL3-201ENST00000312196 DNAH5Q8TE73 4624 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 DNAH8Q96JB1 4490 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 BCL2L11O43521 198 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 SNAI2O43623 268 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 S100A4P26447 101 aaKnown RBP5.64□□□□□ -1.51
MSL3-201ENST00000312196 RAB4BP61018 213 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 ZC2HC1AQ96GY0 325 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 MLST8Q9BVC4 326 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 TPPP3Q9BW30 176 aa5.64□□□□□ -1.51
MSL3-201ENST00000312196 LOC100131303A0A0U1RQF7 123 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 TPT1P13693 172 aaKnown RBP5.63□□□□□ -1.51
MSL3-201ENST00000312196 AKR1C3P42330 323 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 UBE2G1P62253 170 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 CST9LP1Q5W188 147 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 PRR27Q6MZM9 219 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 C9orf62Q8N4C0 152 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 NHLRC2Q8NBF2 726 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 NDUFS6O75380 124 aaKnown RBP5.63□□□□□ -1.51
MSL3-201ENST00000312196 OR5AL1P0C617 328 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 OR10J3Q5JRS4 329 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 Q8N814 137 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 MANBALQ9NQG1 85 aa5.63□□□□□ -1.51
MSL3-201ENST00000312196 ARMS2P0C7Q2 107 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
MSL3-201ENST00000312196 A0A1B0GV50 99 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
MSL3-201ENST00000312196 Q6ZSN1 163 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 TCTE3Q8IZS6 198 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 BIN3Q9NQY0 253 aa5.62□□□□□ -1.51
MSL3-201ENST00000312196 KANTRA0A1W2PQU2 76 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 F8WDY8 70 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 UBE2D3P61077 147 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 UBE2D2P62837 147 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 IFITM2Q01629 132 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 Q0VG73 95 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 Q5VSD8 79 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 Q6ZSA8 131 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 DNAJC30Q96LL9 226 aa5.61□□□□□ -1.51
MSL3-201ENST00000312196 KRTAP29-1A8MX34 341 aaPredicted RBP5.6□□□□□ -1.51
MSL3-201ENST00000312196 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
MSL3-201ENST00000312196 TMUB2Q71RG4 321 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 RPL36ALQ969Q0 106 aaKnown RBP5.6□□□□□ -1.51
MSL3-201ENST00000312196 SGK494Q96LW2 274 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 VAX2Q9UIW0 290 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 PHLDA3Q9Y5J5 127 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 UBE2G2P60604 165 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 CACNG7P62955 275 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 C14orf177Q52M58 125 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 DMRTA1Q5VZB9 504 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 ALKAL2Q6UX46 152 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 NIT1Q86X76 327 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 Q8N976 141 aa5.6□□□□□ -1.51
MSL3-201ENST00000312196 H3BVH4 76 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 ZNF561-AS1K7EIQ3 104 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 PSCAO43653 123 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 PAGE4O60829 102 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 C14orf178Q8N769 122 aaPredicted RBP5.59□□□□□ -1.51
MSL3-201ENST00000312196 ZNF471Q9BX82 626 aaPredicted RBP5.59□□□□□ -1.51
MSL3-201ENST00000312196 TRBV7-3A0A075B6L6 115 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 LOC105371267A0A1B0GV96 52 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 GAGE12JA6NER3 117 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 H2AFB1P0C5Y9 115 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 GAGE1Q13065 139 aa5.59□□□□□ -1.51
MSL3-201ENST00000312196 GAGE4Q13068 117 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms