RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 AKAP9Q99996 3911 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 FBN2P35556 2912 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 K7EIM0 57 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 IGHV3-21A0A0B4J1V1 117 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 TRBV7-7A0A0K0K1E9 115 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 EGR2P11161 476 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 NDPQ00604 133 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 PRNTQ86SH4 94 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 ABCA4P78363 2273 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 CRYGAP11844 174 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 HOXB4P17483 251 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 RPL27AP46776 148 aaKnown RBP7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 ITLN2Q8WWU7 325 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 C16orf92Q96LL3 132 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 C9orf85Q96MD7 179 aa7.27□□□□□ -1.25
RBFOX1-201ENST00000311745 NBPF19A0A087WUL8 3843 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 IGKV1-17P01599 117 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 PSMG3-AS1Q96PY0 264 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 CHD8Q9HCK8 2581 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 LINC00305Q7Z4B0 112 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 KLK15Q9H2R5 256 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 TMEM89A2RUT3 159 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 TIRAPP58753 221 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 C10orf113Q5VZT2 155 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 LINC00482Q8N8I6 264 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 KLHL30-AS1Q8NEE0 82 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 RNF5Q99942 180 aa7.26□□□□□ -1.25
RBFOX1-201ENST00000311745 M0R1W7 72 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 IGLV2-11P01706 119 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 UBE2D1P51668 147 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 FANCD2OSQ96PS1 177 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 MLST8Q9BVC4 326 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 ZNF492Q9P255 531 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 SPRY2O43597 315 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 COX7A2P2O60397 106 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 EBI3Q14213 229 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 SPANXCQ9NY87 97 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 PIFOQ8TCI5 191 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 AGPAT4-IT1Q9H0P7 198 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 DPH3P1Q9H4G8 78 aa7.25□□□□□ -1.25
RBFOX1-201ENST00000311745 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 CFC1P0CG37 223 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 ATXN8Q156A1 80 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 VMO1Q7Z5L0 202 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 ELANEP08246 267 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 SHANK2-AS3Q9BTD1 123 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 PRSS22Q9GZN4 317 aa7.24□□□□□ -1.25
RBFOX1-201ENST00000311745 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 KLK9Q2XQG4 91 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 KLK9Q9UKQ9 250 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 SUB1P53999 127 aaKnown RBP eCLIP7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 LMO4P61968 165 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 ZMAT4Q9H898 229 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 IGLV11-55A0A075B6I3 123 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 DPM3Q9P2X0 92 aa7.23□□□□□ -1.25
RBFOX1-201ENST00000311745 NCOR2Q9Y618 2525 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 HLA-DMBP28068 263 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 ZNF575Q86XF7 245 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 GFRA4Q9GZZ7 299 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 CUBNO60494 3623 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 RHOHQ15669 191 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 CT83Q5H943 113 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 C6orf226Q5I0X4 101 aa7.22□□□□□ -1.25
RBFOX1-201ENST00000311745 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.25
RBFOX1-201ENST00000311745 ATOX1O00244 68 aa7.21□□□□□ -1.25
RBFOX1-201ENST00000311745 FAM104BQ5XKR9 115 aa7.21□□□□□ -1.25
RBFOX1-201ENST00000311745 TMEM14CQ9P0S9 112 aa7.21□□□□□ -1.25
RBFOX1-201ENST00000311745 FLNCQ14315 2725 aa7.21□□□□□ -1.25
RBFOX1-201ENST00000311745 SYNJ2BPP57105 145 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 NPC2P61916 151 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 LYZL1Q6UWQ5 148 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 ZNF491Q8N8L2 437 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 NACAE9PAV3 2078 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 H3BRN7 92 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 GAS8-AS1O95177 125 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 GATA1P15976 413 aaPredicted RBP7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 GNLYP22749 145 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 ERCC8Q13216 396 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 C20orf173Q96LM9 149 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 METTL26Q96S19 204 aa7.21□□□□□ -1.26
RBFOX1-201ENST00000311745 Q8N9W7 124 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 IGHV7-81A0A0B4J1V7 117 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 TCRAP04437 139 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 S4R3C0 116 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 PKD1L2Q7Z442 2459 aa7.2□□□□□ -1.26
RBFOX1-201ENST00000311745 TRAV12-3A0A0B4J271 114 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 AVPP01185 164 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 FAM110DQ8TAY7 271 aaPredicted RBP7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 Q96MF0 132 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 Q9H3A6 140 aa7.19□□□□□ -1.26
RBFOX1-201ENST00000311745 PEMTQ9UBM1 199 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms