RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 ZNF48Q96MX3 618 aaPredicted RBP10.94□□□□□ -0.66
SCUBE2-201ENST00000309263 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 M0R1W7 72 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 KHDC1LQ5JSQ8 128 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 Q6ZS46 218 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 OPRPNQ99935 248 aaPredicted RBP10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 ODF3BA8MYP8 253 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 PRO0461Q9UI25 63 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 USP24Q9UPU5 2620 aa10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
SCUBE2-201ENST00000309263 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
SCUBE2-201ENST00000309263 TCL1BO95988 128 aa10.92□□□□□ -0.66
SCUBE2-201ENST00000309263 PRSS2P07478 247 aa10.92□□□□□ -0.66
SCUBE2-201ENST00000309263 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
SCUBE2-201ENST00000309263 XGP55808 180 aa10.92□□□□□ -0.66
SCUBE2-201ENST00000309263 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 A8MWV9 139 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 C9JAW5 83 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 IGHV4-39P01824 125 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 CD7P09564 240 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 PF4V1P10720 104 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 SCGB1A1P11684 91 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 LGALS3P17931 250 aaKnown RBP10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 CFAP126Q5VTH2 177 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 NPC2P61916 151 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 CFAP46Q8IYW2 2715 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 SRSF2Q01130 221 aaKnown RBP10.91□□□□□ -0.66
SCUBE2-201ENST00000309263 ZNF56Q15929 161 aa10.9□□□□□ -0.66
SCUBE2-201ENST00000309263 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
SCUBE2-201ENST00000309263 FAM159AQ6UWV7 190 aa10.9□□□□□ -0.66
SCUBE2-201ENST00000309263 TRPT1Q86TN4 253 aaKnown RBP10.9□□□□□ -0.66
SCUBE2-201ENST00000309263 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
SCUBE2-201ENST00000309263 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
SCUBE2-201ENST00000309263 NRGNQ92686 78 aa10.89□□□□□ -0.67
SCUBE2-201ENST00000309263 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
SCUBE2-201ENST00000309263 ANAPC13Q9BS18 74 aa10.89□□□□□ -0.67
SCUBE2-201ENST00000309263 HECTD1Q9ULT8 2610 aa10.89□□□□□ -0.67
SCUBE2-201ENST00000309263 FHL3Q13643 280 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 LYRM7Q5U5X0 104 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 Q6ZUT4 128 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 NDUFA11Q86Y39 141 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 TRAV12-2A0A075B6T6 113 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 TRAV41A0A0B4J266 112 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 SDHAF1A6NFY7 115 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 C9orf139Q6ZV77 190 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 ANKRD29Q8N6D5 301 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 Q8N6K4 173 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 CDIP1Q9H305 208 aa10.88□□□□□ -0.67
SCUBE2-201ENST00000309263 PPDPFLQ8WWR9 84 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 RNF183Q96D59 192 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 TSPEAR-AS2P59090 65 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 MINOS1Q5TGZ0 78 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 MINOS1-NBL1R4GNA1 71 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 PSMG3-AS1Q96PY0 264 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 BPESC1Q9GZL8 116 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 NBEAL2Q6ZNJ1 2754 aa10.87□□□□□ -0.67
SCUBE2-201ENST00000309263 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 IGHV3-73A0A0B4J1V6 119 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 A0A0J9YY99 117 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 GATA3P23771 443 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 MUC4Q99102 2169 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 PMVKQ15126 192 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 RNASE13Q5GAN3 156 aaKnown RBP10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 TEN1Q86WV5 123 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 A4D1N5 150 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 CFC1BP0CG36 223 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 CFC1P0CG37 223 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
SCUBE2-201ENST00000309263 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 J3QQQ9 107 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 EDN2P20800 178 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 PRO1854Q9UHT4 67 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 CRYGDP07320 174 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 RHPN1-AS1Q9BWJ2 59 aa10.85□□□□□ -0.67
SCUBE2-201ENST00000309263 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 TEX29Q8N6K0 151 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 SLC25A20O43772 301 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 ZNF688P0C7X2 276 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 SPXQ9BT56 116 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 VPS13CQ709C8 3753 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 RNASE3P12724 160 aaKnown RBP10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
SCUBE2-201ENST00000309263 TSHBP01222 138 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 UBE2D1P51668 147 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 C10orf126Q8N4M7 172 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 TEX15Q9BXT5 2789 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 OOSP1A8MZH6 123 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 ZNRF2Q8NHG8 242 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 ZNF580Q9UK33 172 aa10.83□□□□□ -0.68
SCUBE2-201ENST00000309263 NPFFO15130 113 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms