RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CST9LQ9H4G1 147 aa3.7□□□□□ -1.82
CKS1B-201ENST00000308987 NXT2Q9NPJ8 142 aaKnown RBP3.7□□□□□ -1.82
CKS1B-201ENST00000308987 MINOS1-NBL1R4GNA1 71 aa3.7□□□□□ -1.82
CKS1B-201ENST00000308987 IGHV3-21A0A0B4J1V1 117 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 GAGE10A6NGK3 116 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 OR2T8A6NH00 312 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 FABP5P3A8MUU1 101 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 H3BTX0 84 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 H3BUX3 64 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ATP5LO75964 103 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 CSN3P07498 182 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 CD28P10747 220 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 CD24P25063 80 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 FCER1GP30273 86 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 CKS2P33552 79 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ZNF138P52744 262 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 LY6EQ16553 131 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 NSUN5P1Q3KNT7 163 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 LDLRAD2Q5SZI1 272 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 UFSP1Q6NVU6 142 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ADAMTSL5Q6ZMM2 481 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 DYNAPQ8N1N2 210 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 Q8N6K4 173 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 FER1L6-AS1Q8NA97 138 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ARPC1AQ92747 370 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 C17orf77Q96MU5 243 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 AP1S3Q96PC3 154 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ASCL2Q99929 193 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 MAP1LC3AQ9H492 121 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ZNF702PQ9H963 129 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 C21orf62Q9NYP8 219 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 ONECUT1Q9UBC0 465 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 KMT2AQ03164 3969 aa3.69□□□□□ -1.82
CKS1B-201ENST00000308987 IGHV4-4A0A075B6R2 117 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 TRAV8-6A0A0B4J262 113 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 CBY3A6NI87 242 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 M0R3E3 92 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 NCR2O95944 276 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 SMIM17P0DL12 118 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 EVI2AP22794 236 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 COX7A1P24310 79 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 TAL2Q16559 108 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 TCTEX1D4Q5JR98 221 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 Q6ZVH6 145 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 AMN1Q8IY45 258 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 OR8A1Q8NGG7 326 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 CITED2Q99967 270 aaPredicted RBP3.68□□□□□ -1.82
CKS1B-201ENST00000308987 LENEPQ9Y5L5 61 aa3.68□□□□□ -1.82
CKS1B-201ENST00000308987 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 RYR1P21817 5038 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 TMEM213A2RRL7 107 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 LINC01549A6NIU2 74 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 LINC01619G3V211 115 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 K7EMI3 77 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 K7EP34 96 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 NPYP01303 97 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 IGHG4P01861 327 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 CTSGP08311 255 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 UBE2E1P51965 193 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 CACNG7P62955 275 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 TMEM95Q3KNT9 176 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 LHFPL4Q7Z7J7 247 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 Q8N2B8 174 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 Q8N8P6 123 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 WFDC9Q8NEX5 89 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 OR2K2Q8NGT1 345 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 RNF185Q96GF1 192 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 VPS25Q9BRG1 176 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 SMAD5-AS1Q9Y6J3 95 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 HERC2O95714 4834 aa3.67□□□□□ -1.82
CKS1B-201ENST00000308987 TRAV12-1A0A0B4J245 112 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 A0A0G2JLM5 398 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 LOC389332A0A1B0GUA5 103 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 A0A1W2PPM0 123 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 H0Y8G0 127 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 ZNF207O43670 478 aaKnown RBP3.66□□□□□ -1.82
CKS1B-201ENST00000308987 BUB3O43684 328 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 DPM2O94777 84 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 TNFRSF6BO95407 300 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 FAM106CPP0CH98 169 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 SMIM13P0DJ93 91 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 APELAP0DMC3 54 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 BLCAPP62952 87 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 TWIST1Q15672 202 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 C10orf99Q6UWK7 81 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 Q6ZTC4 211 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 TMEM219Q86XT9 240 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 NDUFA11Q86Y39 141 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 ZNF502Q8TBZ5 544 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 MRAP2Q96G30 205 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 TPPP3Q9BW30 176 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 TM2D2Q9BX73 214 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 HHLA3Q9XRX5 114 aa3.66□□□□□ -1.82
CKS1B-201ENST00000308987 IGLV2-18A0A075B6J9 118 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms