RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 NRGNQ92686 78 aa13.65□□□□□ -0.22
RETREG1-201ENST00000306320 IGSF10Q6WRI0 2623 aa13.65□□□□□ -0.22
RETREG1-201ENST00000306320 HERVK_113P61574 105 aa13.65□□□□□ -0.22
RETREG1-201ENST00000306320 PIFOQ8TCI5 191 aa13.65□□□□□ -0.22
RETREG1-201ENST00000306320 JPT2Q9H910 190 aa13.65□□□□□ -0.22
RETREG1-201ENST00000306320 TEX49A0A1B0GTD5 131 aa13.65□□□□□ -0.23
RETREG1-201ENST00000306320 GNRH2O43555 120 aa13.65□□□□□ -0.23
RETREG1-201ENST00000306320 PSMG4Q5JS54 123 aa13.65□□□□□ -0.23
RETREG1-201ENST00000306320 IGKV3-20P01619 116 aa13.64□□□□□ -0.23
RETREG1-201ENST00000306320 LGALS3P17931 250 aaKnown RBP13.64□□□□□ -0.23
RETREG1-201ENST00000306320 ORMDL2Q53FV1 153 aa13.64□□□□□ -0.23
RETREG1-201ENST00000306320 ZNF462Q96JM2 2506 aa13.64□□□□□ -0.23
RETREG1-201ENST00000306320 CFC1BP0CG36 223 aa13.64□□□□□ -0.23
RETREG1-201ENST00000306320 CFC1P0CG37 223 aa13.64□□□□□ -0.23
RETREG1-201ENST00000306320 F8W735 103 aaPredicted RBP13.63□□□□□ -0.23
RETREG1-201ENST00000306320 SAA4P35542 130 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 PRR9Q5T870 116 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 FAM159AQ6UWV7 190 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 A4D1N5 150 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 CCDC168Q8NDH2 2452 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 LINC01559Q495D7 138 aa13.63□□□□□ -0.23
RETREG1-201ENST00000306320 IGLV11-55A0A075B6I3 123 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 LY6G5BQ8NDX9 201 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 EPG5Q9HCE0 2579 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 IGHV7-4-1A0A0J9YVY3 117 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 NEXN-AS1Q8NBZ9 246 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 PRO1854Q9UHT4 67 aa13.62□□□□□ -0.23
RETREG1-201ENST00000306320 ATP6V0E1O15342 81 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 HTN1P15515 57 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 TSPEAR-AS2P59090 65 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE12JA6NER3 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE7O76087 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 GAGE4Q13068 117 aa13.61□□□□□ -0.23
RETREG1-201ENST00000306320 C11orf71Q6IPW1 123 aa13.6□□□□□ -0.23
RETREG1-201ENST00000306320 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
RETREG1-201ENST00000306320 IGHV7-81A0A0B4J1V7 117 aa13.6□□□□□ -0.23
RETREG1-201ENST00000306320 MAPK1IP1LQ8NDC0 245 aa13.6□□□□□ -0.23
RETREG1-201ENST00000306320 NDUFV3P56181 108 aaKnown RBP13.59□□□□□ -0.23
RETREG1-201ENST00000306320 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 LINC00477Q96M19 166 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 MYO9AB2RTY4 2548 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 A0A0J9YY99 117 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
RETREG1-201ENST00000306320 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
RETREG1-201ENST00000306320 TRAV8-4A0A0B4J246 113 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 IGHV3-11P01762 117 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 ELANEP08246 267 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 IFITM1P13164 125 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 TMEM262E9PQX1 116 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 ZNF56Q15929 161 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 ZNF580Q9UK33 172 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 BUB3O43684 328 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 CD7P09564 240 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 UBE2D1P51668 147 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 ATP6V0E2Q8NHE4 81 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
RETREG1-201ENST00000306320 TRAV12-3A0A0B4J271 114 aa13.57□□□□□ -0.24
RETREG1-201ENST00000306320 ASIPP42127 132 aa13.57□□□□□ -0.24
RETREG1-201ENST00000306320 FBXL19-AS1Q494R0 122 aa13.57□□□□□ -0.24
RETREG1-201ENST00000306320 METTL26Q96S19 204 aa13.57□□□□□ -0.24
RETREG1-201ENST00000306320 Q6ZSV7 163 aa13.57□□□□□ -0.24
RETREG1-201ENST00000306320 MEIG1Q5JSS6 88 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 Q8N1Y9 231 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 Q8N9W7 124 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 DUX3Q96PT4 197 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 SLC50A1Q9BRV3 221 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 UCNP55089 124 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 UBE2D3P61077 147 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 UBE2D2P62837 147 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 CNFNQ9BYD5 112 aa13.56□□□□□ -0.24
RETREG1-201ENST00000306320 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
RETREG1-201ENST00000306320 MUSTN1Q8IVN3 82 aa13.55□□□□□ -0.24
RETREG1-201ENST00000306320 CHCHD5Q9BSY4 110 aa13.55□□□□□ -0.24
RETREG1-201ENST00000306320 J3QQQ9 107 aa13.55□□□□□ -0.24
RETREG1-201ENST00000306320 RPL32P62910 135 aaKnown RBP13.54□□□□□ -0.24
RETREG1-201ENST00000306320 SPXQ9BT56 116 aa13.54□□□□□ -0.24
RETREG1-201ENST00000306320 NAV2Q8IVL1 2488 aa13.54□□□□□ -0.24
RETREG1-201ENST00000306320 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
RETREG1-201ENST00000306320 M0R1W7 72 aa13.53□□□□□ -0.24
RETREG1-201ENST00000306320 C2orf82Q6UX34 121 aa13.53□□□□□ -0.24
RETREG1-201ENST00000306320 NPBQ8NG41 125 aa13.53□□□□□ -0.24
RETREG1-201ENST00000306320 RBAKDNA6NC62 111 aa13.53□□□□□ -0.24
RETREG1-201ENST00000306320 OR10J6PQ8NGY7 276 aa13.52□□□□□ -0.24
RETREG1-201ENST00000306320 WNK1Q9H4A3 2382 aa13.52□□□□□ -0.24
RETREG1-201ENST00000306320 IGHV3-30P01768 117 aa13.52□□□□□ -0.24
RETREG1-201ENST00000306320 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.24
RETREG1-201ENST00000306320 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.24
RETREG1-201ENST00000306320 TMEM95Q3KNT9 176 aa13.52□□□□□ -0.25
RETREG1-201ENST00000306320 CLEC2BQ92478 149 aa13.52□□□□□ -0.25
RETREG1-201ENST00000306320 SIRPDQ9H106 197 aa13.52□□□□□ -0.25
RETREG1-201ENST00000306320 IGHV3-73A0A0B4J1V6 119 aa13.51□□□□□ -0.25
RETREG1-201ENST00000306320 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms