RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 K7EIM0 57 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 RPL39LQ96EH5 51 aaKnown RBP5.95□□□□□ -1.46
SF3B3-201ENST00000302516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-201ENST00000302516 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 IGKV2-29A2NJV5 120 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-201ENST00000302516 ADAMTS20P59510 1910 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 NOP10Q9NPE3 64 aaKnown RBP5.95□□□□□ -1.46
SF3B3-201ENST00000302516 CCDC168Q8NDH2 2452 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 IGHV1-58A0A0C4DH39 117 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 WI2-2373I1.2A0A1W2PRP0 233 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 FXYD2P54710 66 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 C16orf54Q6UWD8 224 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 RNF138Q8WVD3 245 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 U3KQE9 123 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 TRAV4A0A0B4J268 109 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 GNRH2O43555 120 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 PTPRSQ13332 1948 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 GTSF1Q8WW33 167 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 IGF2-ASQ6U949 168 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 C1orf43Q9BWL3 253 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 CHKB-CPT1BH3BT56 60 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 NDUFS5O43920 106 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 MDFICQ9P1T7 246 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
SF3B3-201ENST00000302516 UNQ6494/PRO21346Q6UXR6 183 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 LINC00643Q86TS7 51 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 C3orf56Q8N813 242 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 K7EMT4 169 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 LY6HO94772 140 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 FAM215AQ9Y5M1 114 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 NDUFA11Q86Y39 141 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 TMEM61Q8N0U2 210 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 RNF223E7ERA6 249 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 NREPQ16612 68 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 C17orf77Q96MU5 243 aa5.94□□□□□ -1.46
SF3B3-201ENST00000302516 RNASE8Q8TDE3 154 aaKnown RBP5.93□□□□□ -1.46
SF3B3-201ENST00000302516 BUB3O43684 328 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 IGKV1-17P01599 117 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 MIAQ16674 131 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 WFDC9Q8NEX5 89 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 NAV3Q8IVL0 2385 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 RAI1Q7Z5J4 1906 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-201ENST00000302516 CRYGBP07316 175 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 ZNF503Q96F45 646 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 ODF3Q96PU9 254 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 NDUFV3P56181 108 aaKnown RBP5.93□□□□□ -1.46
SF3B3-201ENST00000302516 NDUFA1O15239 70 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 Q6ZUT4 128 aa5.93□□□□□ -1.46
SF3B3-201ENST00000302516 C11orf1Q9H5F2 150 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 C19orf71A6NCJ1 209 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 UBE2BP63146 152 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 IGHV7-81A0A0B4J1V7 117 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 H7C423 109 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 CTSGP08311 255 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 DEFB121Q5J5C9 76 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 A0A1B0GXF2 115 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 LYPD6Q86Y78 171 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 TDRG1Q3Y452 100 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 HIST2H2BCQ6DN03 193 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 TIRAPP58753 221 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 PTPRBP23467 1997 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 IGLV2-23P01705 113 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 DIAPH2-AS1Q14236 149 aa5.92□□□□□ -1.46
SF3B3-201ENST00000302516 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
SF3B3-201ENST00000302516 PRRC2AP48634 2157 aaKnown RBP5.91□□□□□ -1.46
SF3B3-201ENST00000302516 UQCRQO14949 82 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 GYPEP15421 78 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 WFDC2Q14508 124 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 ZMAT4Q9H898 229 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 CENPVL3A0A0U1RRI6 287 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 NUPR1O60356 82 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 C9orf66Q5T8R8 295 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 MUC22E2RYF6 1773 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-201ENST00000302516 CCL24O00175 119 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 PLA2G2CQ5R387 149 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 ZNF524Q96C55 264 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 HIGD2BQ4VC39 106 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 GPHB5Q86YW7 130 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 C5orf56Q8N8D9 126 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 Q96MF0 132 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 A0A0J9YXY3 114 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 CLPSL2Q6UWE3 100 aa5.91□□□□□ -1.46
SF3B3-201ENST00000302516 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 TEX22C9J3V5 150 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 WISP1O95388 367 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 C4orf3Q8WVX3 66 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 NOTCH2Q04721 2471 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 IGKV2D-24A0A075B6R9 120 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 PROP1O75360 226 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 IGLV2-14P01704 120 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 ASPHD1Q5U4P2 390 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 DIRC1Q969H9 104 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 CGB3P0DN86 165 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 PATE2Q6UY27 113 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 FAM208BQ5VWN6 2430 aa5.9□□□□□ -1.46
SF3B3-201ENST00000302516 TRBV12-3P01733 135 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 C5orf47Q569G3 176 aa5.9□□□□□ -1.47
SF3B3-201ENST00000302516 DKK4Q9UBT3 224 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms