RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 AP1S3Q96PC3 154 aa10.81□□□□□ -0.68
SMG8-201ENST00000300917 VPS25Q9BRG1 176 aa10.81□□□□□ -0.68
SMG8-201ENST00000300917 FCER1GP30273 86 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 RBX1P62877 108 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 Q8N2B8 174 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1A1P0DJD3 496 aaKnown RBP10.8□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1CP0DJD4 496 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 GAGE1Q13065 139 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1FQ15415 496 aaKnown RBP10.8□□□□□ -0.68
SMG8-201ENST00000300917 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 RAX2Q96IS3 184 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 NMUP48645 174 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 RNF152Q8N8N0 203 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 TTTY13Q9BZ97 58 aa10.8□□□□□ -0.68
SMG8-201ENST00000300917 IGLV2-18A0A075B6J9 118 aa10.79□□□□□ -0.68
SMG8-201ENST00000300917 IGHV3OR16-12A0A075B7B8 117 aa10.79□□□□□ -0.68
SMG8-201ENST00000300917 LAGE3Q14657 143 aa10.79□□□□□ -0.68
SMG8-201ENST00000300917 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
SMG8-201ENST00000300917 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
SMG8-201ENST00000300917 PEMTQ9UBM1 199 aa10.79□□□□□ -0.68
SMG8-201ENST00000300917 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 SMIM2Q9BVW6 85 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 ST20Q9HBF5 79 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
SMG8-201ENST00000300917 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
SMG8-201ENST00000300917 ZNF56Q15929 161 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 NSUN5P1Q3KNT7 163 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 CSTL1Q9H114 145 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 SCRT2Q9NQ03 307 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 TMEM160Q9NX00 188 aa10.78□□□□□ -0.68
SMG8-201ENST00000300917 FOXI2Q6ZQN5 318 aa10.77□□□□□ -0.68
SMG8-201ENST00000300917 ANK3Q12955 4377 aaKnown RBP10.77□□□□□ -0.69
SMG8-201ENST00000300917 IGHV3-16A0A0C4DH30 117 aa10.77□□□□□ -0.69
SMG8-201ENST00000300917 ZNF256Q9Y2P7 627 aaPredicted RBP10.77□□□□□ -0.69
SMG8-201ENST00000300917 CCL24O00175 119 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 SAMD13Q5VXD3 122 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 AMTNQ6UX39 209 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 DUSP14O95147 198 aaKnown RBP10.76□□□□□ -0.69
SMG8-201ENST00000300917 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
SMG8-201ENST00000300917 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 XCL2Q9UBD3 114 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 H3BMM0 161 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 LGALS9CQ6DKI2 356 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 GTSCR1Q86UQ5 136 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
SMG8-201ENST00000300917 PROK1P58294 105 aa10.74□□□□□ -0.69
SMG8-201ENST00000300917 MRPL35Q9NZE8 188 aaKnown RBP10.74□□□□□ -0.69
SMG8-201ENST00000300917 EMP1P54849 157 aa10.74□□□□□ -0.69
SMG8-201ENST00000300917 LINC00315P59091 139 aa10.74□□□□□ -0.69
SMG8-201ENST00000300917 COL5A1-AS1Q5SY13 56 aa10.74□□□□□ -0.69
SMG8-201ENST00000300917 SCGB3A1Q96QR1 104 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 WFDC10AQ9H1F0 79 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 KIF25-AS1Q9Y6Z4 181 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 P0DMU3 169 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 FAM231AP0DMU4 169 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 FAM231CP0DMU5 169 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 LINC01587Q99440 93 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 VWFP04275 2813 aa10.73□□□□□ -0.69
SMG8-201ENST00000300917 IGKV2D-26A0A0A0MRZ7 120 aa10.72□□□□□ -0.69
SMG8-201ENST00000300917 SAP30O75446 220 aa10.72□□□□□ -0.69
SMG8-201ENST00000300917 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
SMG8-201ENST00000300917 RPL39P62891 51 aaKnown RBP10.72□□□□□ -0.69
SMG8-201ENST00000300917 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
SMG8-201ENST00000300917 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
SMG8-201ENST00000300917 MRPS16Q9Y3D3 137 aaKnown RBP10.72□□□□□ -0.69
SMG8-201ENST00000300917 HIVEP1P15822 2718 aa10.71□□□□□ -0.69
SMG8-201ENST00000300917 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
SMG8-201ENST00000300917 NBEAL2Q6ZNJ1 2754 aa10.71□□□□□ -0.69
SMG8-201ENST00000300917 ATRQ13535 2644 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 SDHAF1A6NFY7 115 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.7
SMG8-201ENST00000300917 MED14OSP0DP75 135 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 COX8AP10176 69 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 ZNF418Q8TF45 676 aaPredicted RBP10.71□□□□□ -0.7
SMG8-201ENST00000300917 C9orf85Q96MD7 179 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 Q9UF83 564 aa10.71□□□□□ -0.7
SMG8-201ENST00000300917 IGKCP01834 107 aa10.7□□□□□ -0.7
SMG8-201ENST00000300917 ODF3L2Q3SX64 289 aa10.7□□□□□ -0.7
SMG8-201ENST00000300917 TEX29Q8N6K0 151 aa10.7□□□□□ -0.7
SMG8-201ENST00000300917 SYT8Q8NBV8 401 aa10.7□□□□□ -0.7
SMG8-201ENST00000300917 CRYGDP07320 174 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 MRPL52Q86TS9 123 aaKnown RBP10.69□□□□□ -0.7
SMG8-201ENST00000300917 ATP5LO75964 103 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 LY6G6DO95868 133 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 PTTG1IPP53801 180 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
SMG8-201ENST00000300917 CITED1Q99966 193 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms