RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 A4D1N5 150 aa8.87□□□□□ -0.99
GCN1-201ENST00000300648 COL8A2P25067 703 aa8.87□□□□□ -0.99
GCN1-201ENST00000300648 TECTAO75443 2155 aa8.87□□□□□ -0.99
GCN1-201ENST00000300648 IGHV3-16A0A0C4DH30 117 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 CRYGBP07316 175 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 NPBQ8NG41 125 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 XCL1P47992 114 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 TRAV4A0A0B4J268 109 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 MLANAQ16655 118 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 ZMAT4Q9H898 229 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 LTBP2Q14767 1821 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 NUP210LQ5VU65 1888 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 BUB3O43684 328 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 GP9P14770 177 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 LYRM9A8MSI8 78 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 IGF2BP2-AS1Q96M15 143 aa8.86□□□□□ -0.99
GCN1-201ENST00000300648 NDUFV3P56181 108 aaKnown RBP8.85□□□□□ -0.99
GCN1-201ENST00000300648 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 NDUFA1O15239 70 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 LHBP01229 141 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 K7ERS5 55 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 CGB3P0DN86 165 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 PTH2Q96A98 100 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 VPREB3Q9UKI3 123 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 HIST2H2BCQ6DN03 193 aa8.85□□□□□ -0.99
GCN1-201ENST00000300648 TRBV12-3P01733 135 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 ZNF503Q96F45 646 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 PRR31Q5SQ13 230 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 C9orf47Q6ZRZ4 202 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 Q6ZUT4 128 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 TIRAPP58753 221 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 TMEM61Q8N0U2 210 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 CGB7P0DN87 165 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 C1orf195Q5TG92 126 aa8.84□□□□□ -0.99
GCN1-201ENST00000300648 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
GCN1-201ENST00000300648 ZNF581Q9P0T4 197 aa8.83□□□□□ -1
GCN1-201ENST00000300648 DKK4Q9UBT3 224 aa8.83□□□□□ -1
GCN1-201ENST00000300648 CAMK2N2Q96S95 79 aa8.83□□□□□ -1
GCN1-201ENST00000300648 TM2D2Q9BX73 214 aa8.83□□□□□ -1
GCN1-201ENST00000300648 AGPAT4-IT1Q9H0P7 198 aa8.83□□□□□ -1
GCN1-201ENST00000300648 DIRC1Q969H9 104 aa8.83□□□□□ -1
GCN1-201ENST00000300648 LINC00205P59089 165 aa8.82□□□□□ -1
GCN1-201ENST00000300648 DEFB104AQ8WTQ1 72 aa8.82□□□□□ -1
GCN1-201ENST00000300648 C14orf132Q9NPU4 83 aa8.82□□□□□ -1
GCN1-201ENST00000300648 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
GCN1-201ENST00000300648 PLA2G2CQ5R387 149 aa8.82□□□□□ -1
GCN1-201ENST00000300648 RNF144BQ7Z419 303 aa8.82□□□□□ -1
GCN1-201ENST00000300648 KIR2DL5BQ8NHK3 375 aa8.82□□□□□ -1
GCN1-201ENST00000300648 SLX1AQ9BQ83 275 aa8.82□□□□□ -1
GCN1-201ENST00000300648 G3V318 75 aa8.82□□□□□ -1
GCN1-201ENST00000300648 FGF23Q9GZV9 251 aaPredicted RBP8.82□□□□□ -1
GCN1-201ENST00000300648 H7C423 109 aa8.81□□□□□ -1
GCN1-201ENST00000300648 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
GCN1-201ENST00000300648 IGKV2D-24A0A075B6R9 120 aa8.81□□□□□ -1
GCN1-201ENST00000300648 WDR86Q86TI4 376 aa8.81□□□□□ -1
GCN1-201ENST00000300648 CFHR3Q02985 330 aa8.81□□□□□ -1
GCN1-201ENST00000300648 C10orf105Q8TEF2 133 aa8.81□□□□□ -1
GCN1-201ENST00000300648 NOP10Q9NPE3 64 aaKnown RBP8.81□□□□□ -1
GCN1-201ENST00000300648 TRBV10-1A0A0K0K1A3 114 aa8.81□□□□□ -1
GCN1-201ENST00000300648 ODF1Q14990 250 aa8.81□□□□□ -1
GCN1-201ENST00000300648 NDUFA11Q86Y39 141 aa8.81□□□□□ -1
GCN1-201ENST00000300648 A0A0J9YXY3 114 aa8.81□□□□□ -1
GCN1-201ENST00000300648 FXYD2P54710 66 aa8.81□□□□□ -1
GCN1-201ENST00000300648 MIAQ16674 131 aa8.81□□□□□ -1
GCN1-201ENST00000300648 A0A0U1RQV1 116 aa8.81□□□□□ -1
GCN1-201ENST00000300648 Q6ZR03 302 aa8.8□□□□□ -1
GCN1-201ENST00000300648 MDFICQ9P1T7 246 aa8.8□□□□□ -1
GCN1-201ENST00000300648 K7EMT4 169 aa8.8□□□□□ -1
GCN1-201ENST00000300648 HOXB4P17483 251 aaPredicted RBP8.8□□□□□ -1
GCN1-201ENST00000300648 RPL18AQ02543 176 aaKnown RBP8.8□□□□□ -1
GCN1-201ENST00000300648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.8□□□□□ -1
GCN1-201ENST00000300648 FAM236DA0A1B0GTK5 79 aa8.8□□□□□ -1
GCN1-201ENST00000300648 IGKV2-29A2NJV5 120 aaPredicted RBP8.8□□□□□ -1
GCN1-201ENST00000300648 FAM236CP0DP71 79 aa8.8□□□□□ -1
GCN1-201ENST00000300648 PRB4P10163 310 aaPredicted RBP8.79□□□□□ -1
GCN1-201ENST00000300648 C14orf177Q52M58 125 aa8.79□□□□□ -1
GCN1-201ENST00000300648 TLN2Q9Y4G6 2542 aa8.79□□□□□ -1
GCN1-201ENST00000300648 SPART-AS1P0CW21 52 aa8.79□□□□□ -1
GCN1-201ENST00000300648 LY6DQ14210 128 aa8.79□□□□□ -1
GCN1-201ENST00000300648 IGLV11-55A0A075B6I3 123 aa8.79□□□□□ -1
GCN1-201ENST00000300648 IGKV3D-7A0A0C4DH55 119 aa8.79□□□□□ -1
GCN1-201ENST00000300648 UPK3BQ9BT76 320 aa8.79□□□□□ -1
GCN1-201ENST00000300648 ANKRD39Q53RE8 183 aa8.79□□□□□ -1
GCN1-201ENST00000300648 C9orf66Q5T8R8 295 aa8.79□□□□□ -1
GCN1-201ENST00000300648 WIPF3A6NGB9 483 aa8.79□□□□□ -1
GCN1-201ENST00000300648 GNLYP22749 145 aa8.78□□□□□ -1
GCN1-201ENST00000300648 WFDC2Q14508 124 aa8.78□□□□□ -1
GCN1-201ENST00000300648 HIST2H2BDQ6DRA6 164 aa8.78□□□□□ -1
GCN1-201ENST00000300648 C16orf54Q6UWD8 224 aa8.78□□□□□ -1
GCN1-201ENST00000300648 ODF3Q96PU9 254 aa8.78□□□□□ -1
GCN1-201ENST00000300648 C4orf48Q5BLP8 95 aa8.78□□□□□ -1
GCN1-201ENST00000300648 Q6ZSR3 168 aa8.78□□□□□ -1
GCN1-201ENST00000300648 PIP4P1Q86T03 277 aa8.78□□□□□ -1
GCN1-201ENST00000300648 RUSC1-AS1Q66K80 236 aa8.78□□□□□ -1
GCN1-201ENST00000300648 I3L2K1 104 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms