RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TMEM263Q8WUH6 116 aaKnown RBP9.81□□□□□ -0.84
TVP23A-201ENST00000299866 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 AMELXQ99217 191 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 SPTBN2O15020 2390 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 PPP1R17O96001 155 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 RNASE3P12724 160 aaKnown RBP9.81□□□□□ -0.84
TVP23A-201ENST00000299866 LINC00477Q96M19 166 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 BDP1A6H8Y1 2624 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 IGHV1-69DA0A0B4J2H0 117 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 ATXN8Q156A1 80 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 PRO3102Q9H379 93 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 ANKRD11Q6UB99 2663 aaPredicted RBP9.8□□□□□ -0.84
TVP23A-201ENST00000299866 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 ODF3Q96PU9 254 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 ANKHD1Q8IWZ3 2542 aaKnown RBP9.8□□□□□ -0.84
TVP23A-201ENST00000299866 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 M0R1W7 72 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 SUMO4Q6EEV6 95 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 NBASA2RRP1 2371 aa9.8□□□□□ -0.84
TVP23A-201ENST00000299866 VCYO14598 125 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 C9orf139Q6ZV77 190 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 ZNF580Q9UK33 172 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 PRSS2P07478 247 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 RPL32P62910 135 aaKnown RBP9.79□□□□□ -0.84
TVP23A-201ENST00000299866 ZNF876PQ49A33 203 aa9.79□□□□□ -0.84
TVP23A-201ENST00000299866 ITLN2Q8WWU7 325 aaPredicted RBP9.78□□□□□ -0.84
TVP23A-201ENST00000299866 MUC4Q99102 2169 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
TVP23A-201ENST00000299866 PRR30Q53SZ7 412 aaPredicted RBP9.78□□□□□ -0.84
TVP23A-201ENST00000299866 LENEPQ9Y5L5 61 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 H3BMM0 161 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 LINC00315P59091 139 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 C2orf82Q6UX34 121 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 UBE2WQ96B02 151 aa9.78□□□□□ -0.84
TVP23A-201ENST00000299866 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.84
TVP23A-201ENST00000299866 EBI3Q14213 229 aa9.77□□□□□ -0.84
TVP23A-201ENST00000299866 TIMM17AQ99595 171 aa9.77□□□□□ -0.84
TVP23A-201ENST00000299866 TRIAP1O43715 76 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 PIP4P1Q86T03 277 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 U3KQE9 123 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 P0DMU3 169 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 FAM231AP0DMU4 169 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 FAM231CP0DMU5 169 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 NPC2P61916 151 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 CFAP161Q6P656 301 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 UNQ9165/PRO28630Q6UXU0 137 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 KIF25-AS1Q9Y6Z4 181 aa9.77□□□□□ -0.85
TVP23A-201ENST00000299866 A0A0B4J2C4 111 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 OVOL1O14753 267 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 LEPROTO15243 131 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 TRBV10-2A0A0K0K1G8 114 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 OTOGLQ3ZCN5 2332 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 SPTA1P02549 2419 aa9.76□□□□□ -0.85
TVP23A-201ENST00000299866 ASH1LQ9NR48 2969 aaKnown RBP9.76□□□□□ -0.85
TVP23A-201ENST00000299866 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 ZNF56Q15929 161 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 DUX3Q96PT4 197 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.75□□□□□ -0.85
TVP23A-201ENST00000299866 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 ZFP36P26651 326 aaKnown RBP9.75□□□□□ -0.85
TVP23A-201ENST00000299866 RELNP78509 3460 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 A0A087WW49 117 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 FOXC1Q12948 553 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 Q6ZSV7 163 aa9.75□□□□□ -0.85
TVP23A-201ENST00000299866 M0QXV9 152 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 MINOS1Q5TGZ0 78 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 SPXQ9BT56 116 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 MINOS1-NBL1R4GNA1 71 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 OOSP1A8MZH6 123 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 LGALS9O00182 355 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 FAM110AQ9BQ89 295 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 CHCHD5Q9BSY4 110 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
TVP23A-201ENST00000299866 Q6Q795 121 aa9.74□□□□□ -0.85
TVP23A-201ENST00000299866 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 UBE2E1P51965 193 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 CLEC2BQ92478 149 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 PTPRZ1P23471 2315 aaPredicted RBP9.73□□□□□ -0.85
TVP23A-201ENST00000299866 A0A0J9YXY3 114 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 DEFB123Q8N688 67 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 AKAP13Q12802 2813 aa9.73□□□□□ -0.85
TVP23A-201ENST00000299866 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 M0R2P5 195 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 IGHV3-11P01762 117 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
TVP23A-201ENST00000299866 RIF1Q5UIP0 2472 aaKnown RBP9.72□□□□□ -0.85
TVP23A-201ENST00000299866 H7C423 109 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 SAA4P35542 130 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 Q8NA96 180 aa9.72□□□□□ -0.85
TVP23A-201ENST00000299866 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.85
TVP23A-201ENST00000299866 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 439.2 ms