RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 H7C2G1 150 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 EMP1P54849 157 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 NACAE9PAV3 2078 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 ITPR2Q14571 2701 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 S100A4P26447 101 aaKnown RBP7.69□□□□□ -1.18
FOXN4-201ENST00000299162 SPANXN1Q5VSR9 72 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 TMEM158Q8WZ71 300 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 NIPBLQ6KC79 2804 aaeCLIP7.69□□□□□ -1.18
FOXN4-201ENST00000299162 IGLL5B9A064 214 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 IGKCP01834 107 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 HTN1P15515 57 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 RNASE4P34096 147 aaKnown RBP7.69□□□□□ -1.18
FOXN4-201ENST00000299162 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 SCGB1D4Q6XE38 83 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 RHPN1-AS1Q9BWJ2 59 aa7.69□□□□□ -1.18
FOXN4-201ENST00000299162 PRR9Q5T870 116 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 RAX2Q96IS3 184 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 IGKV3D-20A0A0C4DH25 116 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 MAPKAPK5-AS1Q8N8E1 139 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 MRPL35Q9NZE8 188 aaKnown RBP7.68□□□□□ -1.18
FOXN4-201ENST00000299162 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
FOXN4-201ENST00000299162 VCX2Q9H322 139 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
FOXN4-201ENST00000299162 CSDC2Q9Y534 153 aaKnown RBP7.68□□□□□ -1.18
FOXN4-201ENST00000299162 DEFB136Q30KP8 78 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 CEND1Q8N111 149 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 TEP1Q99973 2627 aaKnown RBP7.67□□□□□ -1.18
FOXN4-201ENST00000299162 ZNF688P0C7X2 276 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 Q6AWC8 147 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 FN1P02751 2386 aaKnown RBP7.67□□□□□ -1.18
FOXN4-201ENST00000299162 F8W1H4 67 aa7.67□□□□□ -1.18
FOXN4-201ENST00000299162 A6NDX4 124 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 MGPP08493 103 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 DPM2O94777 84 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 SCGB1C2P0DMR2 95 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 OR10J6PQ8NGY7 276 aa7.66□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE12JA6NER3 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 FAM223BA6NKX1 122 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE7O76087 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 IGHG2P01859 326 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE12FP0CL80 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE12GP0CL81 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE12IP0CL82 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 SYNJ2BPP57105 145 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GAGE4Q13068 117 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 FAM223AQ8IWN6 122 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 MYOZ3Q8TDC0 251 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 TRAV12-2A0A075B6T6 113 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 GNRH2O43555 120 aa7.65□□□□□ -1.18
FOXN4-201ENST00000299162 FOXI1Q12951 378 aa7.65□□□□□ -1.19
FOXN4-201ENST00000299162 C5orf47Q569G3 176 aa7.65□□□□□ -1.19
FOXN4-201ENST00000299162 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 TNFRSF6BO95407 300 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 HLA-DRB4P13762 266 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
FOXN4-201ENST00000299162 ZNF843Q8N446 348 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 HLA-DRB4X5D2U9 266 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 ZFP2Q6ZN57 461 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 GPHB5Q86YW7 130 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 C14orf178Q8N769 122 aaPredicted RBP7.64□□□□□ -1.19
FOXN4-201ENST00000299162 LINC01356Q8N9X3 169 aa7.64□□□□□ -1.19
FOXN4-201ENST00000299162 UBR5O95071 2799 aaPredicted RBP7.64□□□□□ -1.19
FOXN4-201ENST00000299162 TRBV6-1A0A0K0K1D8 114 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
FOXN4-201ENST00000299162 PSMG4Q5JS54 123 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 ZFAND6Q6FIF0 208 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 PHLDA1Q8WV24 401 aaPredicted RBP7.63□□□□□ -1.19
FOXN4-201ENST00000299162 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 C18orf65Q6ZTR6 163 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 Q96MF0 132 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 TENM4Q6N022 2769 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 GCN1Q92616 2671 aaKnown RBP7.63□□□□□ -1.19
FOXN4-201ENST00000299162 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 FAM159AQ6UWV7 190 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 DAZ1Q9NQZ3 744 aaKnown RBP7.63□□□□□ -1.19
FOXN4-201ENST00000299162 PHLDA3Q9Y5J5 127 aa7.63□□□□□ -1.19
FOXN4-201ENST00000299162 LOC107984640A0A0U1RRK4 108 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 NDUFA4O00483 81 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 TEX29Q8N6K0 151 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 HHLA3Q9XRX5 114 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 A0A1W2PRX2 142 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 E9PLD3 99 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
FOXN4-201ENST00000299162 C9orf139Q6ZV77 190 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 RNF185Q96GF1 192 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 JPT2Q9H910 190 aa7.62□□□□□ -1.19
FOXN4-201ENST00000299162 SMCPP49901 116 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms