RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
RPN1-201ENST00000296255 F5H697 171 aa12.39□□□□□ -0.43
RPN1-201ENST00000296255 IGHV4-59P01825 116 aa12.39□□□□□ -0.43
RPN1-201ENST00000296255 MORN3Q6PF18 240 aaPredicted RBP12.39□□□□□ -0.43
RPN1-201ENST00000296255 AMTNQ6UX39 209 aa12.39□□□□□ -0.43
RPN1-201ENST00000296255 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
RPN1-201ENST00000296255 TRAV12-2A0A075B6T6 113 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 VCYO14598 125 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 IGKV3-20P01619 116 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 ZNF580Q9UK33 172 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 SDHAF1A6NFY7 115 aa12.38□□□□□ -0.43
RPN1-201ENST00000296255 USP9XQ93008 2570 aaPredicted RBP12.38□□□□□ -0.43
RPN1-201ENST00000296255 B4DSR2 109 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 LGALS9O00182 355 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 PMVKQ15126 192 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 A0A0J9YX75 114 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 F8W1H4 67 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 SCGB2A2Q13296 93 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 DEFB112Q30KQ8 113 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 FAM74A4Q5TZK3 123 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 SPANXB1Q9NS25 103 aaPredicted RBP12.37□□□□□ -0.43
RPN1-201ENST00000296255 DOPEY1Q5JWR5 2465 aa12.37□□□□□ -0.43
RPN1-201ENST00000296255 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 NRGNQ92686 78 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 HOXA3O43365 443 aaPredicted RBP12.36□□□□□ -0.43
RPN1-201ENST00000296255 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 Q8N1Y9 231 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 TMEM141Q96I45 108 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
RPN1-201ENST00000296255 PRO0461Q9UI25 63 aa12.35□□□□□ -0.43
RPN1-201ENST00000296255 K7EQG2 157 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 MTURNQ8N3F0 131 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 M0QY20 66 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 PGPEP1Q9NXJ5 209 aa12.34□□□□□ -0.43
RPN1-201ENST00000296255 ZNF256Q9Y2P7 627 aaPredicted RBP12.34□□□□□ -0.43
RPN1-201ENST00000296255 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 A0A0J9YY99 117 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 UBE2D1P51668 147 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 SNRPD3P62318 126 aaKnown RBP12.33□□□□□ -0.44
RPN1-201ENST00000296255 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 SH2D6Q7Z4S9 175 aa12.33□□□□□ -0.44
RPN1-201ENST00000296255 ZANQ9Y493 2812 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
RPN1-201ENST00000296255 ZNF56Q15929 161 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 SYNJ2BPP57105 145 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 GAGE13Q4V321 117 aa12.32□□□□□ -0.44
RPN1-201ENST00000296255 OPRPNQ99935 248 aaPredicted RBP12.32□□□□□ -0.44
RPN1-201ENST00000296255 HERVK_113P61574 105 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 ETDBQ3ZM63 59 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 MRPL16Q9NX20 251 aaKnown RBP12.31□□□□□ -0.44
RPN1-201ENST00000296255 GATA3P23771 443 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 SYT8Q8NBV8 401 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 SORL1Q92673 2214 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 DUX5Q96PT3 197 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 AMELXQ99217 191 aa12.31□□□□□ -0.44
RPN1-201ENST00000296255 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 TMEM89A2RUT3 159 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 P0DMU3 169 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
RPN1-201ENST00000296255 TMEM238LA0A1B0GVL6 79 aa12.29□□□□□ -0.44
RPN1-201ENST00000296255 A6NJY4 79 aa12.29□□□□□ -0.44
RPN1-201ENST00000296255 USP9YO00507 2555 aaPredicted RBP12.29□□□□□ -0.44
RPN1-201ENST00000296255 TSPAN13O95857 204 aa12.29□□□□□ -0.44
RPN1-201ENST00000296255 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
RPN1-201ENST00000296255 SPAG8Q99932 426 aaPredicted RBP12.28□□□□□ -0.44
RPN1-201ENST00000296255 SFTA2Q6UW10 78 aa12.28□□□□□ -0.44
RPN1-201ENST00000296255 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
RPN1-201ENST00000296255 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
RPN1-201ENST00000296255 A0A096LNT2 108 aa12.27□□□□□ -0.44
RPN1-201ENST00000296255 MAPK1IP1LQ8NDC0 245 aa12.27□□□□□ -0.44
RPN1-201ENST00000296255 APOMO95445 188 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 IGHV3-30P01768 117 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 RBMY1A1P0DJD3 496 aaKnown RBP12.27□□□□□ -0.45
RPN1-201ENST00000296255 RBMY1CP0DJD4 496 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 IGHV3-30-5P0DP03 117 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 RBMY1FQ15415 496 aaKnown RBP12.27□□□□□ -0.45
RPN1-201ENST00000296255 RHOHQ15669 191 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 SLC25A29Q8N8R3 303 aa12.27□□□□□ -0.45
RPN1-201ENST00000296255 TSSC4Q9Y5U2 329 aaPredicted RBP12.27□□□□□ -0.45
RPN1-201ENST00000296255 MXRA5Q9NR99 2828 aa12.26□□□□□ -0.45
RPN1-201ENST00000296255 TMEM238C9JI98 176 aa12.26□□□□□ -0.45
RPN1-201ENST00000296255 HOXD3P31249 432 aaPredicted RBP12.26□□□□□ -0.45
RPN1-201ENST00000296255 DSCR9P59020 149 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms