RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 FAM240AA0A1B0GVK7 77 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
SSRP1-202ENST00000293880 ETV2O00321 342 aaPredicted RBP12.51□□□□□ -0.41
SSRP1-202ENST00000293880 IGLV1-44P01699 117 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 GP9P14770 177 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 Q6ZUT4 128 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 SLX1AQ9BQ83 275 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 UPK3BQ9BT76 320 aa12.51□□□□□ -0.41
SSRP1-202ENST00000293880 NRGNQ92686 78 aa12.5□□□□□ -0.41
SSRP1-202ENST00000293880 COX7A2LO14548 114 aa12.5□□□□□ -0.41
SSRP1-202ENST00000293880 C11orf53Q8IXP5 236 aa12.5□□□□□ -0.41
SSRP1-202ENST00000293880 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
SSRP1-202ENST00000293880 NDUFB1O75438 58 aa12.5□□□□□ -0.41
SSRP1-202ENST00000293880 ABCA4P78363 2273 aa12.49□□□□□ -0.41
SSRP1-202ENST00000293880 FAM236DA0A1B0GTK5 79 aa12.49□□□□□ -0.41
SSRP1-202ENST00000293880 FAM236CP0DP71 79 aa12.49□□□□□ -0.41
SSRP1-202ENST00000293880 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
SSRP1-202ENST00000293880 AJUBAQ96IF1 538 aa12.49□□□□□ -0.41
SSRP1-202ENST00000293880 I3L2K1 104 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 Q8N1Y9 231 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 ATP6V0E2Q8NHE4 81 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 PATE2Q6UY27 113 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 UBE2AP49459 152 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 CEMP1Q6PRD7 247 aaPredicted RBP12.48□□□□□ -0.41
SSRP1-202ENST00000293880 NFE4Q86UQ8 179 aa12.48□□□□□ -0.41
SSRP1-202ENST00000293880 KIAA1671Q9BY89 1806 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 IGHV4-30-2A0A087WSY4 118 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 BLCAPP62952 87 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 IGLC6P0CF74 106 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 C3orf22Q8N5N4 141 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 TOMM6Q96B49 74 aa12.47□□□□□ -0.41
SSRP1-202ENST00000293880 J3QLI3 93 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 SPTAN1Q13813 2472 aaKnown RBP12.46□□□□□ -0.41
SSRP1-202ENST00000293880 PLXNA2O75051 1894 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 ROS1P08922 2347 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 ELANEP08246 267 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 C1orf195Q5TG92 126 aa12.46□□□□□ -0.41
SSRP1-202ENST00000293880 NDUFC2-KCTD14E9PQ53 114 aa12.46□□□□□ -0.42
SSRP1-202ENST00000293880 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.42
SSRP1-202ENST00000293880 RLFQ13129 1914 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 IGHV7-81A0A0B4J1V7 117 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 IGLV3-1P01715 115 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 CADP27708 2225 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 TEX49A0A1B0GTD5 131 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 TCL1BO95988 128 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 PRR4Q16378 134 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 SNURFQ9Y675 71 aa12.45□□□□□ -0.42
SSRP1-202ENST00000293880 ATP5G1P05496 136 aa12.44□□□□□ -0.42
SSRP1-202ENST00000293880 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
SSRP1-202ENST00000293880 K7EIM0 57 aa12.44□□□□□ -0.42
SSRP1-202ENST00000293880 P0DMU3 169 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 FAM231AP0DMU4 169 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 FAM231CP0DMU5 169 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 ABCA1O95477 2261 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 CLUHP3Q96NS8 147 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 IL15RAQ13261 267 aa12.43□□□□□ -0.42
SSRP1-202ENST00000293880 CENPVL3A0A0U1RRI6 287 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
SSRP1-202ENST00000293880 DAZ4Q86SG3 579 aaKnown RBP12.42□□□□□ -0.42
SSRP1-202ENST00000293880 DAZ3Q9NR90 486 aaKnown RBP12.42□□□□□ -0.42
SSRP1-202ENST00000293880 HEATR5AQ86XA9 2040 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 DOCK7Q96N67 2140 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 HHLA3Q9XRX5 114 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
SSRP1-202ENST00000293880 IGHV4-61A0A0C4DH41 118 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 H3BUA1 57 aa12.42□□□□□ -0.42
SSRP1-202ENST00000293880 ENHOQ6UWT2 76 aa12.41□□□□□ -0.42
SSRP1-202ENST00000293880 H0YGX0 51 aa12.41□□□□□ -0.42
SSRP1-202ENST00000293880 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
SSRP1-202ENST00000293880 USF3Q68DE3 2245 aa12.41□□□□□ -0.42
SSRP1-202ENST00000293880 SPATA12Q7Z6I5 190 aa12.41□□□□□ -0.42
SSRP1-202ENST00000293880 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
SSRP1-202ENST00000293880 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 E7EUB6 86 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 TP53TG3Q9ULZ0 132 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 MIR7-3HGQ8N6C7 128 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 CTSGP08311 255 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 PIP4P1Q86T03 277 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 RETNQ9HD89 108 aa12.4□□□□□ -0.42
SSRP1-202ENST00000293880 IGLV11-55A0A075B6I3 123 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 A6NED7 52 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 M0QXV9 152 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 HIST2H2BDQ6DRA6 164 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 CCDC179H3BU77 68 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 IGFL3Q6UXB1 125 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 CASC2Q6XLA1 102 aa12.39□□□□□ -0.43
SSRP1-202ENST00000293880 CACNA1HO95180 2353 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 LRCOL1A6NCL2 159 aa12.38□□□□□ -0.43
SSRP1-202ENST00000293880 SLPIP03973 132 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms