RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CD300EQ496F6 205 aaPredicted RBP4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 RASL10AQ92737 203 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 MRPL35Q9NZE8 188 aaKnown RBP4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 LENEPQ9Y5L5 61 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 PDZD2O15018 2839 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 PLA2G2AP14555 144 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 Q8N8P6 123 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 PSMG3-AS1Q96PY0 264 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 SCGB3A1Q96QR1 104 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 CITED2Q99967 270 aaPredicted RBP4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 SMIM2Q9BVW6 85 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 RAB37Q96AX2 223 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 FSHBP01225 129 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 P0DMU3 169 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 FAM231AP0DMU4 169 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 FAM231CP0DMU5 169 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 RPL39P62891 51 aaKnown RBP4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 SCRT2Q9NQ03 307 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 AKAP9Q99996 3911 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 IGHV1OR15-1A0A075B7D0 117 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 KLLNB2CW77 178 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 PROK1P58294 105 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 SUMO4Q6EEV6 95 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 LINC01587Q99440 93 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 VWFP04275 2813 aa4.49□□□□□ -1.69
TNFSF4-201ENST00000281834 K7EP13 123 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 LRRC75A-AS1Q8N1F1 130 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 OR4C5Q8NGB2 326 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 WFDC10AQ9H1F0 79 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 PEMTQ9UBM1 199 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 SDHAF1A6NFY7 115 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 SAP30O75446 220 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 IGKCP01834 107 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1A1P0DJD3 496 aaKnown RBP4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1CP0DJD4 496 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 ODF1Q14990 250 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1FQ15415 496 aaKnown RBP4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 LGALS9CQ6DKI2 356 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 CCL24O00175 119 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 DUSP14O95147 198 aaKnown RBP4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 BRI3O95415 125 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 GCSHP23434 173 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 RAX2Q96IS3 184 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 JMJD8Q96S16 334 aa4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 OPRPNQ99935 248 aaPredicted RBP4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 MRPS16Q9Y3D3 137 aaKnown RBP4.48□□□□□ -1.69
TNFSF4-201ENST00000281834 DPM2O94777 84 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 COX8AP10176 69 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 FOXI2Q6ZQN5 318 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 TP53TG1Q9Y2A0 90 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 ATP5LO75964 103 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 RPL35AP18077 110 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 SCGB2A2Q13296 93 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 RNASE13Q5GAN3 156 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 FAM19A4Q96LR4 140 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 KIR2DL4Q99706 377 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 MRPL16Q9NX20 251 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 Q9UF83 564 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 IGHV3-38A0A0C4DH36 116 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 BVES-AS1Q5T3Y7 98 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 SYT8Q8NBV8 401 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
TNFSF4-201ENST00000281834 TMEM89A2RUT3 159 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 H3BMM0 161 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 DLEU1O43261 78 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 RIPPLY3P57055 190 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 STHQ8IWL8 128 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 LINC01006Q8NI28 216 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 PHLDA1Q8WV24 401 aaPredicted RBP4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 LGALS9O00182 355 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 ORMDL2Q53FV1 153 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 SAMD13Q5VXD3 122 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 CHTOPQ9Y3Y2 248 aaKnown RBP4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 NSD1Q96L73 2696 aaPredicted RBP4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 KMT2BQ9UMN6 2715 aaPredicted RBP4.46□□□□□ -1.7
TNFSF4-201ENST00000281834 TMEM97Q5BJF2 176 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 PRSS29PA6NIE9 313 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
TNFSF4-201ENST00000281834 CEMP1Q6PRD7 247 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms