RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SPCS1Q9Y6A9 102 aa9.73□□□□□ -0.85
C9orf3-201ENST00000277198 K7EMT4 169 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 FSHBP01225 129 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 FXYD2P54710 66 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 Q6ZQT7 251 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 RASL10AQ92737 203 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 VPS25Q9BRG1 176 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 LINC00527Q9UJ94 153 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 IGHV4-38-2P0DP08 117 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 ANXA2RQ3ZCQ2 193 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 NEXN-AS1Q8NBZ9 246 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 RAB37Q96AX2 223 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
C9orf3-201ENST00000277198 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
C9orf3-201ENST00000277198 J3QLI3 93 aa9.71□□□□□ -0.86
C9orf3-201ENST00000277198 BRD3OSQ6XYD6 125 aa9.71□□□□□ -0.86
C9orf3-201ENST00000277198 NEGR1Q7Z3B1 354 aa9.71□□□□□ -0.86
C9orf3-201ENST00000277198 PHLDA1Q8WV24 401 aaPredicted RBP9.71□□□□□ -0.86
C9orf3-201ENST00000277198 TENM1Q9UKZ4 2725 aa9.71□□□□□ -0.86
C9orf3-201ENST00000277198 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 A0A087WW49 117 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 GATA3P23771 443 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 RHPN1-AS1Q9BWJ2 59 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 ESM1Q9NQ30 184 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 CHTOPQ9Y3Y2 248 aaKnown RBP9.7□□□□□ -0.86
C9orf3-201ENST00000277198 ANK2Q01484 3957 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 KLLNB2CW77 178 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 ID1P41134 155 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 TTTY13Q9BZ97 58 aa9.7□□□□□ -0.86
C9orf3-201ENST00000277198 OR11H12B2RN74 326 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 H3BUX3 64 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 PF4V1P10720 104 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
C9orf3-201ENST00000277198 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
C9orf3-201ENST00000277198 RPL11P62913 178 aaKnown RBP9.69□□□□□ -0.86
C9orf3-201ENST00000277198 CFHR3Q02985 330 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 C14orf178Q8N769 122 aaPredicted RBP9.69□□□□□ -0.86
C9orf3-201ENST00000277198 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 OR11H2Q8NH07 326 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 DUX5Q96PT3 197 aa9.69□□□□□ -0.86
C9orf3-201ENST00000277198 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 KLK15Q9H2R5 256 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 MYMXA0A1B0GTQ4 84 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 E9PLD3 99 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 G3V4G9 280 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 PAPPA-AS1Q5QFB9 102 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
C9orf3-201ENST00000277198 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
C9orf3-201ENST00000277198 J3KRW8 73 aa9.67□□□□□ -0.86
C9orf3-201ENST00000277198 IGHV3-11P01762 117 aa9.67□□□□□ -0.86
C9orf3-201ENST00000277198 COTL1Q14019 142 aa9.67□□□□□ -0.86
C9orf3-201ENST00000277198 LY6EQ16553 131 aa9.67□□□□□ -0.86
C9orf3-201ENST00000277198 NHP2Q9NX24 153 aaKnown RBP9.67□□□□□ -0.86
C9orf3-201ENST00000277198 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
C9orf3-201ENST00000277198 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 TMEM89A2RUT3 159 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 C21orf62-AS1Q17RA5 79 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 FAM159AQ6UWV7 190 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 RPL39LQ96EH5 51 aaKnown RBP9.66□□□□□ -0.86
C9orf3-201ENST00000277198 NAA38Q9BRA0 125 aaKnown RBP9.66□□□□□ -0.86
C9orf3-201ENST00000277198 GNRH2O43555 120 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 MGPP08493 103 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 LINC00315P59091 139 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 HILS1P60008 231 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 BLCAPP62952 87 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 HIST1H4GQ99525 98 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
C9orf3-201ENST00000277198 TRBV7-3A0A075B6L6 115 aa9.65□□□□□ -0.86
C9orf3-201ENST00000277198 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
C9orf3-201ENST00000277198 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
C9orf3-201ENST00000277198 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
C9orf3-201ENST00000277198 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 IGLL5B9A064 214 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 F6UB75 175 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 ZNF418Q8TF45 676 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-201ENST00000277198 F8W1H4 67 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 VCYO14598 125 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 SAP30O75446 220 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 POLR2KP53803 58 aaKnown RBP9.64□□□□□ -0.87
C9orf3-201ENST00000277198 TMEM141Q96I45 108 aa9.64□□□□□ -0.87
C9orf3-201ENST00000277198 TRBV6-5A0A0K0K1A5 114 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 K7ERJ3 54 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 PSMB8P28062 276 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 KIR2DL4Q99706 377 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 DNAJC9-AS1A6NH13 148 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 DEFB1P60022 68 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 DEFB112Q30KQ8 113 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 TEX29Q8N6K0 151 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 TIMM17AQ99595 171 aa9.63□□□□□ -0.87
C9orf3-201ENST00000277198 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
C9orf3-201ENST00000277198 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
C9orf3-201ENST00000277198 A6NJY4 79 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms