RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 KRTAP10-1P60331 282 aa6.5□□□□□ -1.37
LRTM1-201ENST00000273286 RAB2AP61019 212 aa6.5□□□□□ -1.37
LRTM1-201ENST00000273286 LINC01556Q5JQF7 62 aa6.5□□□□□ -1.37
LRTM1-201ENST00000273286 PQLC2Q6ZP29 291 aa6.5□□□□□ -1.37
LRTM1-201ENST00000273286 IGLV5-52A0A0A0MRZ9 124 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 TRAV8-6A0A0B4J262 113 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 CTXND1A0A1B0GTU2 59 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 TEX46H3BTG2 121 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 LCE1EQ5T753 118 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 Q6ZQT7 251 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 NHLRC2Q8NBF2 726 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 SDF2L1Q9HCN8 221 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 OTORQ9NRC9 128 aa6.49□□□□□ -1.37
LRTM1-201ENST00000273286 SERTM2A0A1B0GWG4 89 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 IBA57-AS1B1ANH7 110 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 CXorf1O96002 111 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 LAGE3Q14657 143 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 FAM213BQ8TBF2 198 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 NDFIP1Q9BT67 221 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 NAGKQ9UJ70 344 aa6.48□□□□□ -1.37
LRTM1-201ENST00000273286 IGHV3-16A0A0C4DH30 117 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 TRBV6-4A0A1B0GX49 114 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
LRTM1-201ENST00000273286 STAG3L2P0CL84 134 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 STAG3L3P0CL85 134 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
LRTM1-201ENST00000273286 RHOHQ15669 191 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 TREM1Q9NP99 234 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 TMEM167BQ9NRX6 74 aa6.47□□□□□ -1.37
LRTM1-201ENST00000273286 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.38
LRTM1-201ENST00000273286 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 LRCOL1A6NCL2 159 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 PGPA6NDG6 321 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 IFNA7P01567 189 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 ARL14EPLP0DKL9 152 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 FUSP35637 526 aaKnown RBP eCLIP6.46□□□□□ -1.38
LRTM1-201ENST00000273286 SULT1A2P50226 295 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 RPL36AP83881 106 aaKnown RBP6.46□□□□□ -1.38
LRTM1-201ENST00000273286 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 OR10J3Q5JRS4 329 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 Q8N814 137 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.38
LRTM1-201ENST00000273286 K7EQM0 130 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 TYMSP04818 313 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 MGST1P10620 155 aaKnown RBP6.45□□□□□ -1.38
LRTM1-201ENST00000273286 LELP1Q5T871 98 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 ALKAL2Q6UX46 152 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 PTH2Q96A98 100 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 FAT1Q14517 4588 aa6.45□□□□□ -1.38
LRTM1-201ENST00000273286 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
LRTM1-201ENST00000273286 HMGB3O15347 200 aaKnown RBP6.44□□□□□ -1.38
LRTM1-201ENST00000273286 GNRH2O43555 120 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 SMR3BP02814 79 aaPredicted RBP6.44□□□□□ -1.38
LRTM1-201ENST00000273286 GCHFRP30047 84 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 GOLT1AQ6ZVE7 132 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 SLC25A29Q8N8R3 303 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 MBD3L1Q8WWY6 194 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 NKX6-2Q9C056 277 aaPredicted RBP6.44□□□□□ -1.38
LRTM1-201ENST00000273286 RPH3ALQ9UNE2 315 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
LRTM1-201ENST00000273286 TRAV8-3A0A0A6YYJ7 113 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 TRAV1-1A0A0B4J248 108 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 IFNA1P01562 189 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 FHITP49789 147 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 ZNF726P1Q15940 193 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 Q9HAA7 133 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 ARL2-SNX15V9GYD0 113 aa6.43□□□□□ -1.38
LRTM1-201ENST00000273286 LOC100131303A0A0U1RQF7 123 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 F6UZH7 168 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 RS1O15537 224 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 TAGLN2P37802 199 aaKnown RBP6.42□□□□□ -1.38
LRTM1-201ENST00000273286 RAB14P61106 215 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 CFAP126Q5VTH2 177 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 SUN5Q8TC36 379 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 MANBALQ9NQG1 85 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 A0A087WWC5 75 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 A0A1W2PRE2 83 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 FGF8P55075 233 aaPredicted RBP6.42□□□□□ -1.38
LRTM1-201ENST00000273286 SAPCD1Q5SSQ6 148 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 TVP23CQ96ET8 276 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 TCEAL7Q9BRU2 100 aa6.42□□□□□ -1.38
LRTM1-201ENST00000273286 TRAV8-1A0A0A6YYK1 113 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 A8MWV9 139 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 EIF3GO75821 320 aaKnown RBP eCLIP6.41□□□□□ -1.38
LRTM1-201ENST00000273286 IGHV3-30P01768 117 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 IGHV3-33P01772 117 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 TCRAP04437 139 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 IGHV3-30-3P0DP02 117 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 IGHV3-30-5P0DP03 117 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 DEFB104AQ8WTQ1 72 aa6.41□□□□□ -1.38
LRTM1-201ENST00000273286 RMI2Q96E14 147 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms