RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
CNOT9-201ENST00000273064 TMEM190Q8WZ59 177 aa11.15□□□□□ -0.62
CNOT9-201ENST00000273064 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
CNOT9-201ENST00000273064 A0A087WW49 117 aa11.15□□□□□ -0.62
CNOT9-201ENST00000273064 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
CNOT9-201ENST00000273064 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 RPL13AP40429 203 aaKnown RBP11.14□□□□□ -0.63
CNOT9-201ENST00000273064 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 MDFICQ9P1T7 246 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 RELNP78509 3460 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 A0A1B0GV72 72 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 AVPP01185 164 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 TRGV11A0A075B6L2 103 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
CNOT9-201ENST00000273064 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
CNOT9-201ENST00000273064 OPRPNQ99935 248 aaPredicted RBP11.14□□□□□ -0.63
CNOT9-201ENST00000273064 PLNP26678 52 aa11.13□□□□□ -0.63
CNOT9-201ENST00000273064 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
CNOT9-201ENST00000273064 LINC01545Q5VT33 79 aa11.13□□□□□ -0.63
CNOT9-201ENST00000273064 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
CNOT9-201ENST00000273064 ETDBQ3ZM63 59 aa11.13□□□□□ -0.63
CNOT9-201ENST00000273064 SMAGPQ0VAQ4 97 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE1Q13065 139 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE4Q13068 117 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE5Q13069 117 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 MUC4Q99102 2169 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 ITPR1Q14643 2758 aa11.12□□□□□ -0.63
CNOT9-201ENST00000273064 F8VRH5 84 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 IGHG2P01859 326 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 Q8N1Y9 231 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 CST9LQ9H4G1 147 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 LINC01549A6NIU2 74 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 HLA-DRB4P13762 266 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 ZFAND3Q9H8U3 227 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 HELZ2Q9BYK8 2649 aaKnown RBP11.11□□□□□ -0.63
CNOT9-201ENST00000273064 TRBV25-1A0A075B6N4 114 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 A0A096LPF7 62 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 H3BMG7 143 aa11.11□□□□□ -0.63
CNOT9-201ENST00000273064 COX6CP09669 75 aa11.1□□□□□ -0.63
CNOT9-201ENST00000273064 TEP1Q99973 2627 aaKnown RBP11.1□□□□□ -0.63
CNOT9-201ENST00000273064 FXYD2P54710 66 aa11.1□□□□□ -0.63
CNOT9-201ENST00000273064 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
CNOT9-201ENST00000273064 ZNRF2Q8NHG8 242 aa11.1□□□□□ -0.63
CNOT9-201ENST00000273064 TNRC6BQ9UPQ9 1833 aaKnown RBP11.1□□□□□ -0.63
CNOT9-201ENST00000273064 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
CNOT9-201ENST00000273064 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE7O76087 117 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 GTSF1LQ9H1H1 148 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 LINC01619G3V211 115 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
CNOT9-201ENST00000273064 RNASE8Q8TDE3 154 aaKnown RBP11.09□□□□□ -0.63
CNOT9-201ENST00000273064 URB1-AS1Q96HZ7 61 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 P0DMU3 169 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 PRR9Q5T870 116 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 MAST4O15021 2626 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 GATA3P23771 443 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 SCRT2Q9NQ03 307 aa11.09□□□□□ -0.63
CNOT9-201ENST00000273064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-201ENST00000273064 IGKV2-29A2NJV5 120 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-201ENST00000273064 CTRLP40313 264 aa11.08□□□□□ -0.64
CNOT9-201ENST00000273064 ZNF415Q09FC8 603 aa11.08□□□□□ -0.64
CNOT9-201ENST00000273064 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
CNOT9-201ENST00000273064 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
CNOT9-201ENST00000273064 CEMP1Q6PRD7 247 aaPredicted RBP11.08□□□□□ -0.64
CNOT9-201ENST00000273064 TMEM61Q8N0U2 210 aa11.08□□□□□ -0.64
CNOT9-201ENST00000273064 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
CNOT9-201ENST00000273064 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
CNOT9-201ENST00000273064 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
CNOT9-201ENST00000273064 PRORYQ9H606 182 aa11.07□□□□□ -0.64
CNOT9-201ENST00000273064 IGKV2D-26A0A0A0MRZ7 120 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 FSTL3O95633 263 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 PMVKQ15126 192 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 C9orf47Q6ZRZ4 202 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 A0A087WX48 190 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 A6NDX4 124 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 INSP01308 110 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 A0A0J9YXV3 536 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 KRTAP10-9P60411 292 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 TMEM101Q96IK0 257 aa11.06□□□□□ -0.64
CNOT9-201ENST00000273064 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 IGLC6P0CF74 106 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 EBI3Q14213 229 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 ODF1Q14990 250 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 C18orf65Q6ZTR6 163 aa11.05□□□□□ -0.64
CNOT9-201ENST00000273064 Q8N6K4 173 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms