RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 CYB561D1Q8N8Q1 229 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 OR2T35Q8NGX2 323 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 ARL2-SNX15V9GYD0 113 aa5.84□□□□□ -1.47
TPM3-201ENST00000271850 RNF222A6NCQ9 220 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 HNRNPA3P51991 378 aaKnown RBP5.83□□□□□ -1.48
TPM3-201ENST00000271850 NIT1Q86X76 327 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 CIRBP-AS1Q8TBR5 109 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 NDFIP1Q9BT67 221 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 PSMG3Q9BT73 122 aaPredicted RBP5.83□□□□□ -1.48
TPM3-201ENST00000271850 TM2D2Q9BX73 214 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 ALG5Q9Y673 324 aa5.83□□□□□ -1.48
TPM3-201ENST00000271850 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 TRAV8-3A0A0A6YYJ7 113 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 H3BVH4 76 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
TPM3-201ENST00000271850 PIK3CD-AS1Q5SR53 167 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 Q86TA4 180 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 AQP10Q96PS8 301 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
TPM3-201ENST00000271850 TNXBP22105 4242 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 A8MWV9 139 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 KRBOX1C9JBD0 128 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 G3V3Q6 166 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 LGALSLQ3ZCW2 172 aaPredicted RBP5.81□□□□□ -1.48
TPM3-201ENST00000271850 DNLZQ5SXM8 178 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 ATRAIDQ6UW56 229 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 COX8CQ7Z4L0 72 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 DEFB104AQ8WTQ1 72 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 CHAC1Q9BUX1 264 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 KLK12Q9UKR0 248 aa5.81□□□□□ -1.48
TPM3-201ENST00000271850 A0A087WWL8 130 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 GRIFINA4D1Z8 144 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 FAM74A7A6NL05 159 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 M0R036 132 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 PEX7O00628 323 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 SH2D1AO60880 128 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 CXorf1O96002 111 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 ARMS2P0C7Q2 107 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 ASIPP42127 132 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 UBE2G2P60604 165 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 ZFP69Q49AA0 526 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 SAPCD1Q5SSQ6 148 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 RPL7L1Q6DKI1 246 aaKnown RBP5.8□□□□□ -1.48
TPM3-201ENST00000271850 ENHOQ6UWT2 76 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 SFRP2Q96HF1 295 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 TMEM167BQ9NRX6 74 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 TNFSF18Q9UNG2 199 aa5.8□□□□□ -1.48
TPM3-201ENST00000271850 IGKV2D-24A0A075B6R9 120 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 FABP5P3A8MUU1 101 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 B4DEV8 164 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 PANO1I0J062 215 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 S100A4P26447 101 aaKnown RBP5.79□□□□□ -1.48
TPM3-201ENST00000271850 FGF8P55075 233 aaPredicted RBP5.79□□□□□ -1.48
TPM3-201ENST00000271850 UBE2D3P61077 147 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 UBE2D2P62837 147 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 SERF2P84101 59 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 FAM74A4Q5TZK3 123 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 UBE2WQ96B02 151 aa5.79□□□□□ -1.48
TPM3-201ENST00000271850 A0A087WWC5 75 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 RBFOX3A6NFN3 312 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 K7EQM0 130 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 ZNF674Q2M3X9 581 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 TOR2AQ5JU69 321 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 Q8N976 141 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 DAZAP1Q96EP5 407 aaKnown RBP5.78□□□□□ -1.48
TPM3-201ENST00000271850 ACTR3CQ9C0K3 210 aaPredicted RBP5.78□□□□□ -1.48
TPM3-201ENST00000271850 LRP2P98164 4655 aa5.78□□□□□ -1.48
TPM3-201ENST00000271850 TMSB15BA0A087X1C1 80 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 CTXND1A0A1B0GTU2 59 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 M0R381 172 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 RHODO00212 210 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 IGLV2-8P01709 118 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 MBP02144 154 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 MT1HL1P0DM35 61 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 MPV17L2Q567V2 206 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 PRR27Q6MZM9 219 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 NEXN-AS1Q8NBZ9 246 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 OR11H4Q8NGC9 324 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
TPM3-201ENST00000271850 OXTP01178 125 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 LTAP01374 205 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 DEFA1P59665 94 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 DEFA3P59666 94 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 RPL19P84098 196 aaKnown RBP5.76□□□□□ -1.49
TPM3-201ENST00000271850 FAM162BQ5T6X4 162 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 NTM-AS1Q6ZSK4 140 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 CHCHD7Q9BUK0 85 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 CYTL1Q9NRR1 136 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 COX11Q9Y6N1 276 aa5.76□□□□□ -1.49
TPM3-201ENST00000271850 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 TRBV6-1A0A0K0K1D8 114 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 IFNA7P01567 189 aa5.75□□□□□ -1.49
TPM3-201ENST00000271850 PRSS1P07477 247 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms