RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 HILS1P60008 231 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 C9orf85Q96MD7 179 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 GOLT1BQ9Y3E0 138 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 HIVEP1P15822 2718 aa17.05■□□□□ 0.32
RAB40B-201ENST00000269347 DYNLRB2Q8TF09 96 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 TMEM158Q8WZ71 300 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 A0A087WWL8 130 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 PRSS47A8MTI9 375 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 HLA-DRB4P13762 266 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 GAGE1Q13065 139 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 NXT2Q9NPJ8 142 aaKnown RBP17.04■□□□□ 0.32
RAB40B-201ENST00000269347 HLA-DRB4X5D2U9 266 aa17.04■□□□□ 0.32
RAB40B-201ENST00000269347 FN1P02751 2386 aaKnown RBP17.03■□□□□ 0.32
RAB40B-201ENST00000269347 LGALS9BQ3B8N2 356 aa17.03■□□□□ 0.32
RAB40B-201ENST00000269347 LGALS9CQ6DKI2 356 aa17.03■□□□□ 0.32
RAB40B-201ENST00000269347 DEFB104AQ8WTQ1 72 aa17.03■□□□□ 0.32
RAB40B-201ENST00000269347 IFI27L1Q96BM0 104 aa17.03■□□□□ 0.32
RAB40B-201ENST00000269347 IGHV1OR15-1A0A075B7D0 117 aa17.02■□□□□ 0.32
RAB40B-201ENST00000269347 A8MTW9 85 aa17.02■□□□□ 0.32
RAB40B-201ENST00000269347 ADARB2-AS1A8MUL3 147 aa17.02■□□□□ 0.32
RAB40B-201ENST00000269347 DUSP14O95147 198 aaKnown RBP17.02■□□□□ 0.32
RAB40B-201ENST00000269347 FCER1GP30273 86 aa17.02■□□□□ 0.31
RAB40B-201ENST00000269347 DEFB125Q8N687 156 aa17.02■□□□□ 0.31
RAB40B-201ENST00000269347 MRAP2Q96G30 205 aa17.02■□□□□ 0.31
RAB40B-201ENST00000269347 KRTAP10-3P60369 221 aa17.01■□□□□ 0.31
RAB40B-201ENST00000269347 ODF3L2Q3SX64 289 aa17.01■□□□□ 0.31
RAB40B-201ENST00000269347 NEGR1Q7Z3B1 354 aa17■□□□□ 0.31
RAB40B-201ENST00000269347 POM121L12Q8N7R1 296 aa17■□□□□ 0.31
RAB40B-201ENST00000269347 AP1S3Q96PC3 154 aa17■□□□□ 0.31
RAB40B-201ENST00000269347 DKK2Q9UBU2 259 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 COX8AP10176 69 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 HTN1P15515 57 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 MPV17L2Q567V2 206 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 SMIM2Q9BVW6 85 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 VWFP04275 2813 aa16.99■□□□□ 0.31
RAB40B-201ENST00000269347 NPSP0C0P6 89 aa16.98■□□□□ 0.31
RAB40B-201ENST00000269347 TCTAP57738 103 aa16.98■□□□□ 0.31
RAB40B-201ENST00000269347 TSSC4Q9Y5U2 329 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-201ENST00000269347 C2CD3Q4AC94 2353 aa16.98■□□□□ 0.31
RAB40B-201ENST00000269347 TRAV2A0A0B4J234 112 aa16.98■□□□□ 0.31
RAB40B-201ENST00000269347 NACAE9PAV3 2078 aa16.97■□□□□ 0.31
RAB40B-201ENST00000269347 PROK1P58294 105 aa16.97■□□□□ 0.31
RAB40B-201ENST00000269347 SUMO2P61956 95 aaKnown RBP16.97■□□□□ 0.31
RAB40B-201ENST00000269347 ZNF418Q8TF45 676 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-201ENST00000269347 NUDT3O95989 172 aa16.96■□□□□ 0.31
RAB40B-201ENST00000269347 SUMO4Q6EEV6 95 aa16.96■□□□□ 0.31
RAB40B-201ENST00000269347 TMEM160Q9NX00 188 aa16.96■□□□□ 0.31
RAB40B-201ENST00000269347 TENM1Q9UKZ4 2725 aa16.96■□□□□ 0.3
RAB40B-201ENST00000269347 SMIM17P0DL12 118 aa16.95■□□□□ 0.3
RAB40B-201ENST00000269347 LAGE3Q14657 143 aa16.95■□□□□ 0.3
RAB40B-201ENST00000269347 ANKRD39Q53RE8 183 aa16.95■□□□□ 0.3
RAB40B-201ENST00000269347 CRYGDP07320 174 aa16.95■□□□□ 0.3
RAB40B-201ENST00000269347 FAM74A4Q5TZK3 123 aa16.95■□□□□ 0.3
RAB40B-201ENST00000269347 INAFM1C9JVW0 142 aa16.94■□□□□ 0.3
RAB40B-201ENST00000269347 MORN3Q6PF18 240 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-201ENST00000269347 C12orf54Q6X4T0 127 aa16.94■□□□□ 0.3
RAB40B-201ENST00000269347 ORAOV1Q8WV07 137 aa16.94■□□□□ 0.3
RAB40B-201ENST00000269347 SPAG8Q99932 426 aaPredicted RBP16.94■□□□□ 0.3
RAB40B-201ENST00000269347 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
RAB40B-201ENST00000269347 NOTCH3Q9UM47 2321 aa16.93■□□□□ 0.3
RAB40B-201ENST00000269347 CBY3A6NI87 242 aa16.93■□□□□ 0.3
RAB40B-201ENST00000269347 BVES-AS1Q5T3Y7 98 aa16.93■□□□□ 0.3
RAB40B-201ENST00000269347 Q6ZVH6 145 aa16.93■□□□□ 0.3
RAB40B-201ENST00000269347 COX11Q9Y6N1 276 aa16.93■□□□□ 0.3
RAB40B-201ENST00000269347 ODF1Q14990 250 aa16.91■□□□□ 0.3
RAB40B-201ENST00000269347 WFDC10AQ9H1F0 79 aa16.91■□□□□ 0.3
RAB40B-201ENST00000269347 C2orf91Q6ZV80 131 aa16.91■□□□□ 0.3
RAB40B-201ENST00000269347 C20orf78Q9BR46 151 aa16.91■□□□□ 0.3
RAB40B-201ENST00000269347 CSTL1Q9H114 145 aa16.91■□□□□ 0.3
RAB40B-201ENST00000269347 ZNF876PQ49A33 203 aa16.9■□□□□ 0.3
RAB40B-201ENST00000269347 FGF6P10767 208 aa16.89■□□□□ 0.3
RAB40B-201ENST00000269347 F5H697 171 aa16.89■□□□□ 0.29
RAB40B-201ENST00000269347 NDUFA7O95182 113 aa16.89■□□□□ 0.29
RAB40B-201ENST00000269347 PRSS1P07477 247 aa16.89■□□□□ 0.29
RAB40B-201ENST00000269347 XCL2Q9UBD3 114 aa16.88■□□□□ 0.29
RAB40B-201ENST00000269347 SAP30O75446 220 aa16.87■□□□□ 0.29
RAB40B-201ENST00000269347 POLR2KP53803 58 aaKnown RBP16.87■□□□□ 0.29
RAB40B-201ENST00000269347 SPATA3Q8NHX4 192 aa16.87■□□□□ 0.29
RAB40B-201ENST00000269347 Q9UF83 564 aa16.87■□□□□ 0.29
RAB40B-201ENST00000269347 TRRAPQ9Y4A5 3859 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 IGHV3-73A0A0B4J1V6 119 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 M0QY20 66 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 AZU1P20160 251 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 BOD1L2Q8IYS8 172 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 ZMAT4Q9H898 229 aa16.86■□□□□ 0.29
RAB40B-201ENST00000269347 TRGV11A0A075B6L2 103 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 TRAV25A0A0B4J276 109 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 ATP5LO75964 103 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 C11orf72Q8NBR9 251 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 SCGB2A2Q13296 93 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 ZNF56Q15929 161 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 HHLA3Q9XRX5 114 aa16.85■□□□□ 0.29
RAB40B-201ENST00000269347 P0DMU3 169 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 FAM231AP0DMU4 169 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 FAM231CP0DMU5 169 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 NMUP48645 174 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 TRPT1Q86TN4 253 aaKnown RBP16.84■□□□□ 0.29
RAB40B-201ENST00000269347 C1orf158Q8N1D5 194 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 TOMM6Q96B49 74 aa16.84■□□□□ 0.29
RAB40B-201ENST00000269347 TAX1BP3O14907 124 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms