RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CXCL1P09341 107 aa12.96□□□□□ -0.33
USP13-201ENST00000263966 MLANAQ16655 118 aa12.96□□□□□ -0.33
USP13-201ENST00000263966 K7EM74 188 aa12.96□□□□□ -0.33
USP13-201ENST00000263966 PTPRBP23467 1997 aa12.96□□□□□ -0.33
USP13-201ENST00000263966 SRSF3P84103 164 aaKnown RBP12.96□□□□□ -0.33
USP13-201ENST00000263966 PDE6GP18545 87 aa12.96□□□□□ -0.34
USP13-201ENST00000263966 SPAG11BQ08648 103 aa12.96□□□□□ -0.34
USP13-201ENST00000263966 DLEU1O43261 78 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 MRPL35Q9NZE8 188 aaKnown RBP12.95□□□□□ -0.34
USP13-201ENST00000263966 KLK12Q9UKR0 248 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.95□□□□□ -0.34
USP13-201ENST00000263966 LINC00205P59089 165 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 GAGE12HA6NDE8 117 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 JMJD7-PLA2G4BH0Y9G9 81 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 PRR31Q5SQ13 230 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 FHL1Q13642 323 aa12.95□□□□□ -0.34
USP13-201ENST00000263966 USP17L23D6RBM5 183 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 NDUFA11Q86Y39 141 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 TMEM263Q8WUH6 116 aaKnown RBP12.94□□□□□ -0.34
USP13-201ENST00000263966 UBE2D3P61077 147 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 PSMB8P28062 276 aa12.94□□□□□ -0.34
USP13-201ENST00000263966 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
USP13-201ENST00000263966 GNRH2O43555 120 aa12.93□□□□□ -0.34
USP13-201ENST00000263966 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
USP13-201ENST00000263966 A0A087WZ39 114 aa12.93□□□□□ -0.34
USP13-201ENST00000263966 IGLV1-44P01699 117 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 PRB2P02812 416 aaPredicted RBP12.92□□□□□ -0.34
USP13-201ENST00000263966 PIP4P1Q86T03 277 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 CRYGDP07320 174 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 DUX4L9Q6RFH8 374 aaPredicted RBP12.92□□□□□ -0.34
USP13-201ENST00000263966 COX8AP10176 69 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 NPBQ8NG41 125 aa12.92□□□□□ -0.34
USP13-201ENST00000263966 C2orf70A6NJV1 201 aa12.91□□□□□ -0.34
USP13-201ENST00000263966 IGHV2-70P01814 119 aa12.91□□□□□ -0.34
USP13-201ENST00000263966 ZFP36P26651 326 aaKnown RBP12.91□□□□□ -0.34
USP13-201ENST00000263966 UPK3BQ9BT76 320 aa12.91□□□□□ -0.34
USP13-201ENST00000263966 CENPVL3A0A0U1RRI6 287 aa12.91□□□□□ -0.34
USP13-201ENST00000263966 LRP4O75096 1905 aa12.91□□□□□ -0.34
USP13-201ENST00000263966 NCR3O14931 201 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 ESM1Q9NQ30 184 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 IGHV4-38-2P0DP08 117 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 FAM231DQ6ZW35 169 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 C18orf32Q8TCD1 76 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 IGKV2-24A0A0C4DH68 120 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 C11orf52Q96A22 123 aa12.9□□□□□ -0.34
USP13-201ENST00000263966 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
USP13-201ENST00000263966 SIVA1O15304 175 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 FOXL2NBQ6ZUU3 175 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 TMEM89A2RUT3 159 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 IGLC1P0CG04 106 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 ZNF664Q8N3J9 261 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 LINC01548A6NM66 108 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 ATOX1O00244 68 aa12.89□□□□□ -0.35
USP13-201ENST00000263966 ODF1Q14990 250 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 BTCP35070 178 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 SHISA2Q6UWI4 295 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 SLX1AQ9BQ83 275 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 IGLC2P0DOY2 106 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 IGLC3P0DOY3 106 aa12.88□□□□□ -0.35
USP13-201ENST00000263966 IGHV4OR15-8A0A075B7B6 117 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 A0A087WW49 117 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 A0A1W2PPM0 123 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 MAJINQ3KP22 176 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 ALPK3Q96L96 1907 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 WT1-ASQ06250 92 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 WDR86Q86TI4 376 aa12.87□□□□□ -0.35
USP13-201ENST00000263966 A0A0B4J2C4 111 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 CFC1BP0CG36 223 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 CFC1P0CG37 223 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 COX7BP24311 80 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 FXYD5Q96DB9 178 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 MYO9AB2RTY4 2548 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 NPSP0C0P6 89 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 C5orf56Q8N8D9 126 aa12.86□□□□□ -0.35
USP13-201ENST00000263966 TPSG1Q9NRR2 321 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 NPYP01303 97 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 LYL1P12980 280 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 ATRAIDQ6UW56 229 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 ZNF491Q8N8L2 437 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 IGHV1-58A0A0C4DH39 117 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 IGF2-ASQ6U949 168 aa12.85□□□□□ -0.35
USP13-201ENST00000263966 CCL25O15444 150 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 COL5A1P20908 1838 aaPredicted RBP12.84□□□□□ -0.35
USP13-201ENST00000263966 DEFB4AO15263 64 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 A0A087WV48 116 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 QRFPP83859 136 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 AJUBAQ96IF1 538 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 SERP1Q9Y6X1 66 aa12.84□□□□□ -0.35
USP13-201ENST00000263966 ETDBQ3ZM63 59 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms