RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 WNK2Q9Y3S1 2297 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 TRAV2A0A0B4J234 112 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 M0R2P5 195 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 LY6HO94772 140 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 NHLRC4P0CG21 123 aaPredicted RBP9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 FBXL19-AS1Q494R0 122 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 Q8NA96 180 aa9.31□□□□□ -0.92
CHMP2B-201ENST00000263780 LGALS9O00182 355 aa9.3□□□□□ -0.92
CHMP2B-201ENST00000263780 MUSTN1Q8IVN3 82 aa9.3□□□□□ -0.92
CHMP2B-201ENST00000263780 CRIP2P52943 208 aaPredicted RBP9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 NSUN5P1Q3KNT7 163 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 MDFICQ9P1T7 246 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 TRAV41A0A0B4J266 112 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 H3BMM0 161 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 H7C2G1 150 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 COX6CP09669 75 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 WDFY4Q6ZS81 3184 aa9.29□□□□□ -0.92
CHMP2B-201ENST00000263780 RPL11P62913 178 aaKnown RBP9.28□□□□□ -0.92
CHMP2B-201ENST00000263780 ZFP36P26651 326 aaKnown RBP9.28□□□□□ -0.92
CHMP2B-201ENST00000263780 C5orf56Q8N8D9 126 aa9.28□□□□□ -0.92
CHMP2B-201ENST00000263780 CEP250Q9BV73 2442 aa9.28□□□□□ -0.92
CHMP2B-201ENST00000263780 SAA4P35542 130 aa9.27□□□□□ -0.92
CHMP2B-201ENST00000263780 TCF15Q12870 199 aa9.27□□□□□ -0.92
CHMP2B-201ENST00000263780 PRR30Q53SZ7 412 aaPredicted RBP9.27□□□□□ -0.92
CHMP2B-201ENST00000263780 KLLNB2CW77 178 aa9.27□□□□□ -0.93
CHMP2B-201ENST00000263780 H3BT86 120 aa9.27□□□□□ -0.93
CHMP2B-201ENST00000263780 IGHV4-39P01824 125 aa9.27□□□□□ -0.93
CHMP2B-201ENST00000263780 C11orf71Q6IPW1 123 aa9.27□□□□□ -0.93
CHMP2B-201ENST00000263780 C15orf53Q8NAA6 179 aa9.27□□□□□ -0.93
CHMP2B-201ENST00000263780 PCNX1Q96RV3 2341 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 ID1P41134 155 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 C2orf82Q6UX34 121 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 POLEQ07864 2286 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 A0A087WWL8 130 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 ODF3Q96PU9 254 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 ZNF256Q9Y2P7 627 aaPredicted RBP9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 MOB4Q9Y3A3 225 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 ARHGAP32A7KAX9 2087 aa9.26□□□□□ -0.93
CHMP2B-201ENST00000263780 FAM240AA0A1B0GVK7 77 aa9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 CRLF1O75462 422 aa9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 UNQ9165/PRO28630Q6UXU0 137 aa9.25□□□□□ -0.93
CHMP2B-201ENST00000263780 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 F6UB75 175 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 H3BUA1 57 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 NPFFO15130 113 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 BRI3O95415 125 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 JPT2Q9H910 190 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 CFAP47Q6ZTR5 3102 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 KALRNO60229 2985 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 TRIAP1O43715 76 aa9.24□□□□□ -0.93
CHMP2B-201ENST00000263780 I3L3M4 83 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 M0QY20 66 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 ZNF56Q15929 161 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 FAM110AQ9BQ89 295 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 BEX4Q9NWD9 120 aaPredicted RBP9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 MAP1BP46821 2468 aaKnown RBP9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 CCDC179H3BU77 68 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 DEFB1P60022 68 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 YAE1D1Q9NRH1 226 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 SPANXCQ9NY87 97 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 ZFHX4Q86UP3 3567 aa9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 CNOT1A5YKK6 2376 aaKnown RBP9.23□□□□□ -0.93
CHMP2B-201ENST00000263780 FAM74A4Q5TZK3 123 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 C9orf85Q96MD7 179 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 RHPN1-AS1Q9BWJ2 59 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 PRSS2P07478 247 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 DEFB104AQ8WTQ1 72 aa9.22□□□□□ -0.93
CHMP2B-201ENST00000263780 IGLV4-3A0A075B6K6 122 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 A0A0J9YXV3 536 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 ELANEP08246 267 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 DEFB121Q5J5C9 76 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 SMG1Q96Q15 3661 aaKnown RBP9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 APC2O95996 2303 aa9.21□□□□□ -0.93
CHMP2B-201ENST00000263780 IGHV3-64A0A075B6Q5 118 aa9.21□□□□□ -0.94
CHMP2B-201ENST00000263780 IGHV3-16A0A0C4DH30 117 aa9.21□□□□□ -0.94
CHMP2B-201ENST00000263780 H7C423 109 aa9.21□□□□□ -0.94
CHMP2B-201ENST00000263780 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.94
CHMP2B-201ENST00000263780 TRAV12-3A0A0B4J271 114 aa9.2□□□□□ -0.94
CHMP2B-201ENST00000263780 DAZ1Q9NQZ3 744 aaKnown RBP9.2□□□□□ -0.94
CHMP2B-201ENST00000263780 TRBV12-3P01733 135 aa9.2□□□□□ -0.94
CHMP2B-201ENST00000263780 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
CHMP2B-201ENST00000263780 ACYP1P07311 99 aa9.19□□□□□ -0.94
CHMP2B-201ENST00000263780 MIAQ16674 131 aa9.19□□□□□ -0.94
CHMP2B-201ENST00000263780 LITAFQ99732 161 aa9.19□□□□□ -0.94
CHMP2B-201ENST00000263780 ABCA4P78363 2273 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 1275.4 ms