RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SPATA25Q9BR10 227 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 PRKDCP78527 4128 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 HUWE1Q7Z6Z7 4374 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 IGHV3-53P01767 116 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 SLAQ13239 276 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 KIAA1644Q3SXP7 199 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 FAM74A4Q5TZK3 123 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 AMN1Q8IY45 258 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 POM121L12Q8N7R1 296 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 RASL10AQ92737 203 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 B9D2Q9BPU9 175 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
SNRNP40-201ENST00000263694 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 A0A0J9YWU9 116 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 GAS8-AS1O95177 125 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 TRGC2P03986 189 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 CRYGDP07320 174 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 MGPP08493 103 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 CFAP126Q5VTH2 177 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 FRZBQ92765 325 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 RNF185Q96GF1 192 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 GNB1LQ9BYB4 327 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 MRPL18Q9H0U6 180 aaKnown RBP6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 DKK2Q9UBU2 259 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 TRAPPC1Q9Y5R8 145 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 KIF25-AS1Q9Y6Z4 181 aa6.93□□□□□ -1.3
SNRNP40-201ENST00000263694 TRAV26-2A0A0B4J265 109 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 A0A1B0GW15 77 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 TRGC1P0CF51 173 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 LINC00315P59091 139 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 FAM104BQ5XKR9 115 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 RASL11AQ6T310 242 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 Q6ZSN1 163 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 PTH2Q96A98 100 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 ZNF479Q96JC4 524 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 AP1S3Q96PC3 154 aa6.92□□□□□ -1.3
SNRNP40-201ENST00000263694 TRGV2A0A075B6R0 118 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 RS1O15537 224 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 APCSP02743 223 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 GATA1P15976 413 aaPredicted RBP6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 RAB4AP20338 218 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 LGALS9BQ3B8N2 356 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 SMIM15Q7Z3B0 74 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 GATD1Q8NB37 220 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 OR4C5Q8NGB2 326 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 DPH3P1Q9H4G8 78 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 ZMAT4Q9H898 229 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 LYRM9A8MSI8 78 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 F5H697 171 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 NCR2O95944 276 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 S100A8P05109 93 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 UFSP1Q6NVU6 142 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 LINC00612Q8N6U2 182 aa6.91□□□□□ -1.3
SNRNP40-201ENST00000263694 A8MWV9 139 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 PHOX2AO14813 284 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 SPART-AS1P0CW21 52 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 DAD1P61803 113 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 ZNF56Q15929 161 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 COX19Q49B96 90 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 PIK3CD-AS1Q5SR53 167 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 Q9UF83 564 aa6.9□□□□□ -1.31
SNRNP40-201ENST00000263694 STAB2Q8WWQ8 2551 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 TRAV4A0A0B4J268 109 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 D6R8Y8 96 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 MT-ND6P03923 174 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 P0DMU3 169 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 C12orf74Q32Q52 190 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 SUMO4Q6EEV6 95 aa6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 C11orf68Q9H3H3 251 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-201ENST00000263694 HTN3P15516 51 aa6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 HOXA5P20719 270 aa6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 FHL2Q14192 279 aa6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 RPL39LQ96EH5 51 aaKnown RBP6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 KRTAP4-12Q9BQ66 201 aa6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 FBN3Q75N90 2809 aa6.88□□□□□ -1.31
SNRNP40-201ENST00000263694 SRIP30626 198 aa6.87□□□□□ -1.31
SNRNP40-201ENST00000263694 CKS2P33552 79 aa6.87□□□□□ -1.31
SNRNP40-201ENST00000263694 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
SNRNP40-201ENST00000263694 TRGV4A0A0C4DH28 118 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 NPYP01303 97 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 ZFP2Q6ZN57 461 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 Q6ZTC4 211 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 PRELID3AQ96N28 172 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 NDUFAF3Q9BU61 184 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 U3KQK5 164 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 LOC100131303A0A0U1RQF7 123 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 M0QY20 66 aa6.86□□□□□ -1.31
SNRNP40-201ENST00000263694 IQCJQ1A5X6 159 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms