RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 PROP1O75360 226 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 NRGNQ92686 78 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 K7EQD1 137 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 P0DMU3 169 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 CENPVL3A0A0U1RRI6 287 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 ZNF503Q96F45 646 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.29□□□□□ -0.923e-6■■■■□ 19.4
SMG6-201ENST00000263073 ACACAQ13085 2346 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 WISP2O76076 250 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 ODF3L1Q8IXM7 274 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 MED13Q9UHV7 2174 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 TRBV12-3P01733 135 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 KAAG1Q9UBP8 84 aa9.29□□□□□ -0.92
SMG6-201ENST00000263073 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 KRTAP27-1Q3LI81 207 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 SPTAN1Q13813 2472 aaKnown RBP9.28□□□□□ -0.92
SMG6-201ENST00000263073 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 TEX22C9J3V5 150 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 ACYP1P07311 99 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 E9PLD3 99 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 APOC4P55056 127 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 HERV-K104P63124 156 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 TNRC6AQ8NDV7 1962 aaKnown RBP9.28□□□□□ -0.92
SMG6-201ENST00000263073 DSCAML1Q8TD84 2053 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 NCKAP5O14513 1909 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 OBSL1O75147 1896 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 NBASA2RRP1 2371 aa9.28□□□□□ -0.92
SMG6-201ENST00000263073 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.92
SMG6-201ENST00000263073 ATP5G1P05496 136 aa9.27□□□□□ -0.92
SMG6-201ENST00000263073 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.92
SMG6-201ENST00000263073 BRK1Q8WUW1 75 aa9.27□□□□□ -0.92
SMG6-201ENST00000263073 PCNX1Q96RV3 2341 aa9.27□□□□□ -0.92
SMG6-201ENST00000263073 J3KT08 172 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 CCL24O00175 119 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 GATA3P23771 443 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 TEX49A0A1B0GTD5 131 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 CAMK2N2Q96S95 79 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 C16orf54Q6UWD8 224 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 TP53TG3Q9ULZ0 132 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 IGHV4OR15-8A0A075B7B6 117 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 A0A087WW49 117 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 WI2-2373I1.2A0A1W2PRP0 233 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 ATOX1O00244 68 aa9.27□□□□□ -0.93
SMG6-201ENST00000263073 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
SMG6-201ENST00000263073 NDUFA11Q86Y39 141 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 HIGD1BQ9P298 99 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 ABCA4P78363 2273 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 IGHV4-61A0A0C4DH41 118 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 VSIG2Q96IQ7 327 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 IGFL3Q6UXB1 125 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 C11orf1Q9H5F2 150 aa9.26□□□□□ -0.93
SMG6-201ENST00000263073 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 UNQ9165/PRO28630Q6UXU0 137 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 PLXNB3Q9ULL4 1909 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 Q6ZPA2 131 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 MED13LQ71F56 2210 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 Q8N9W7 124 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 GPR179Q6PRD1 2367 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 Q6ZUT4 128 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 MALRD1Q5VYJ5 2156 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 GTF3C1Q12789 2109 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 COX7A2LO14548 114 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 SDIM1Q6ZPB5 146 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
SMG6-201ENST00000263073 IGLV2-8P01709 118 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 ELANEP08246 267 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 SPANXDQ9BXN6 97 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 IGHV4-30-2A0A087WSY4 118 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 NREPQ16612 68 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 SEM1Q6ZVN7 128 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 PLCE1Q9P212 2302 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 C8orf31Q8N9H6 132 aa9.24□□□□□ -0.93
SMG6-201ENST00000263073 ZFP36P26651 326 aaKnown RBP9.23□□□□□ -0.93
SMG6-201ENST00000263073 FUSP35637 526 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMG6-201ENST00000263073 CTRLP40313 264 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 MSMPQ1L6U9 139 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 DKK4Q9UBT3 224 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 SCXQ7RTU7 201 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 COL4A3Q01955 1670 aa9.23□□□□□ -0.93
SMG6-201ENST00000263073 IGKV1D-37A0A075B6S9 117 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 SLPIP03973 132 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 CACNA1HO95180 2353 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
SMG6-201ENST00000263073 C5orf56Q8N8D9 126 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 HIST2H2BDQ6DRA6 164 aa9.22□□□□□ -0.93
SMG6-201ENST00000263073 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms