RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 BAALC-AS2P0C853 105 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
SPG11-201ENST00000261866 UTF1Q5T230 341 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 ACYP1P07311 99 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 MUC6Q6W4X9 2439 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 KLK12Q9UKR0 248 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 IGLL1P15814 213 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 SIRPDQ9H106 197 aa9.37□□□□□ -0.91
SPG11-201ENST00000261866 MED13LQ71F56 2210 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 IGHV4-31P0DP07 118 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 IGKV1-17P01599 117 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 MRPL36Q9P0J6 103 aaKnown RBP9.36□□□□□ -0.91
SPG11-201ENST00000261866 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 MALRD1Q5VYJ5 2156 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 TEX22C9J3V5 150 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 SPRY4Q9C004 299 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 Q6ZVH6 145 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 LINC00482Q8N8I6 264 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 ANKRD29Q8N6D5 301 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 ORMDL1Q9P0S3 153 aa9.36□□□□□ -0.91
SPG11-201ENST00000261866 KRTAP27-1Q3LI81 207 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 M0R2N4 97 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 IGKV4-1P06312 121 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 COX7A2LO14548 114 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 POU2AF1Q16633 256 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 MDFICQ9P1T7 246 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 CACNA1HO95180 2353 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 F8VRH5 84 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 C10orf99Q6UWK7 81 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 FAM231DQ6ZW35 169 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 SLC25A29Q8N8R3 303 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 VSIG2Q96IQ7 327 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 PRO1854Q9UHT4 67 aa9.35□□□□□ -0.91
SPG11-201ENST00000261866 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 HRCT1Q6UXD1 115 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 TP53TG3Q9ULZ0 132 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 MYCNOSP40205 109 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 P0DMU3 169 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 FAM231AP0DMU4 169 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 FAM231CP0DMU5 169 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 GPHB5Q86YW7 130 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 KLK5Q9Y337 293 aaPredicted RBP9.34□□□□□ -0.91
SPG11-201ENST00000261866 MED12LQ86YW9 2145 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 TECTAO75443 2155 aa9.34□□□□□ -0.91
SPG11-201ENST00000261866 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
SPG11-201ENST00000261866 ZNF106Q9H2Y7 1883 aaKnown RBP9.33□□□□□ -0.92
SPG11-201ENST00000261866 LY6G6DO95868 133 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 CEMP1Q6PRD7 247 aaPredicted RBP9.33□□□□□ -0.92
SPG11-201ENST00000261866 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
SPG11-201ENST00000261866 A0A0J9YXV3 536 aa9.32□□□□□ -0.92
SPG11-201ENST00000261866 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.32□□□□□ -0.92
SPG11-201ENST00000261866 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
SPG11-201ENST00000261866 NCOA6Q14686 2063 aaPredicted RBP9.32□□□□□ -0.92
SPG11-201ENST00000261866 A6NDX4 124 aa9.32□□□□□ -0.92
SPG11-201ENST00000261866 RETNQ9HD89 108 aa9.32□□□□□ -0.92
SPG11-201ENST00000261866 OPRPNQ99935 248 aaPredicted RBP9.32□□□□□ -0.92
SPG11-201ENST00000261866 SMR3AQ99954 134 aa9.32□□□□□ -0.92
SPG11-201ENST00000261866 PTPRQQ9UMZ3 2332 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
SPG11-201ENST00000261866 LGALS9BQ3B8N2 356 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 MAP6D1Q9H9H5 199 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 ZFP2Q6ZN57 461 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 TRAV26-1A0A087WT03 109 aa9.31□□□□□ -0.92
SPG11-201ENST00000261866 WNK1Q9H4A3 2382 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 IGLV2-14P01704 120 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 WI2-2373I1.2A0A1W2PRP0 233 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 NDUFB1O75438 58 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 ZNF493Q6ZR52 646 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 NPSP0C0P6 89 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 COX8AP10176 69 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 FAM208BQ5VWN6 2430 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 SEC61GP60059 68 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
SPG11-201ENST00000261866 LECT2O14960 151 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 IGLV1-47P01700 117 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 TMEM258P61165 79 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 FOXI1Q12951 378 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 BVES-AS1Q5T3Y7 98 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
SPG11-201ENST00000261866 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
SPG11-201ENST00000261866 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
SPG11-201ENST00000261866 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 LMO4P61968 165 aa9.29□□□□□ -0.92
SPG11-201ENST00000261866 CCL25O15444 150 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms