RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 RPL39LQ96EH5 51 aaKnown RBP10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 OCIAD2Q56VL3 154 aa10.34□□□□□ -0.75
PDGFRB-201ENST00000261799 ODF3Q96PU9 254 aa10.34□□□□□ -0.75
PDGFRB-201ENST00000261799 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
PDGFRB-201ENST00000261799 IL15RAQ13261 267 aa10.33□□□□□ -0.76
PDGFRB-201ENST00000261799 TP53BP1Q12888 1972 aaPredicted RBP10.33□□□□□ -0.76
PDGFRB-201ENST00000261799 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
PDGFRB-201ENST00000261799 ANAPC13Q9BS18 74 aa10.33□□□□□ -0.76
PDGFRB-201ENST00000261799 TECTAO75443 2155 aa10.33□□□□□ -0.76
PDGFRB-201ENST00000261799 COLCA2A8K830 154 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 GTSF1LQ9H1H1 148 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 PRAC2D3DTV9 90 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 M0R2N4 97 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 TRBV20-1A0A075B6N2 111 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 NDUFS6O75380 124 aaKnown RBP10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 CCL25O15444 150 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 NAA38Q9BRA0 125 aaKnown RBP10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 ABCA4P78363 2273 aa10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 PHF3Q92576 2039 aaKnown RBP10.32□□□□□ -0.76
PDGFRB-201ENST00000261799 SIVA1O15304 175 aa10.31□□□□□ -0.76
PDGFRB-201ENST00000261799 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
PDGFRB-201ENST00000261799 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 NCOR1O75376 2440 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 DIDO1Q9BTC0 2240 aaKnown RBP10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 REG3AQ06141 175 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 SMR3AQ99954 134 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 AKAP6Q13023 2319 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 IGLV2-18A0A075B6J9 118 aa10.3□□□□□ -0.76
PDGFRB-201ENST00000261799 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 LYPD6Q86Y78 171 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 PATE2Q6UY27 113 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 A0A087WZ39 114 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 OBSL1O75147 1896 aa10.29□□□□□ -0.76
PDGFRB-201ENST00000261799 C21orf62-AS1Q17RA5 79 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 LINC01545Q5VT33 79 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 KIR2DL5BA0A0G2JN68 375 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 KIR2DL5BA0A0G2JPC4 375 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 Q6ZTI0 123 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 KIR2DL5AQ8N109 375 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 SIGMAR1Q99720 223 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 IFITM1P13164 125 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 ZNF124Q15973 351 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
PDGFRB-201ENST00000261799 K7EN84 100 aa10.27□□□□□ -0.76
PDGFRB-201ENST00000261799 MPV17L2Q567V2 206 aa10.27□□□□□ -0.76
PDGFRB-201ENST00000261799 LINC00574Q9H8X3 128 aa10.27□□□□□ -0.76
PDGFRB-201ENST00000261799 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 H7C423 109 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 CARD19Q96LW7 228 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 CHKB-CPT1BH3BT56 60 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 K7EQG2 157 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 CEND1Q8N111 149 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 LINC00269Q8N2A0 174 aa10.27□□□□□ -0.77
PDGFRB-201ENST00000261799 WIPF3A6NGB9 483 aa10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 GATA1P15976 413 aaPredicted RBP10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 DEFB1P60022 68 aa10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 PLXNB3Q9ULL4 1909 aa10.26□□□□□ -0.77
PDGFRB-201ENST00000261799 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 H0YGX0 51 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 EBI3Q14213 229 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 C22orf34Q6ZV56 151 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 DENND4AQ7Z401 1863 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 USF3Q68DE3 2245 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
PDGFRB-201ENST00000261799 MPDZO75970 2070 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 U3KQK5 164 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 TRACP01848 142 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 KMT2EQ8IZD2 1858 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 MED12Q93074 2177 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 PSMB8P28062 276 aa10.24□□□□□ -0.77
PDGFRB-201ENST00000261799 DKK2Q9UBU2 259 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 A0A0J9YWU9 116 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 FAM19A1Q7Z5A9 133 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 A0A0J9YXV3 536 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 E7EUB6 86 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 Q6ZVH6 145 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 ZNF407Q9C0G0 2248 aa10.23□□□□□ -0.77
PDGFRB-201ENST00000261799 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 LINC00322Q6ZN03 302 aaPredicted RBP10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 LYPD6BQ8NI32 183 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 COX8AP10176 69 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
PDGFRB-201ENST00000261799 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms