RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 SPTA1P02549 2419 aa9.61□□□□□ -0.87
FOXN3-201ENST00000261302 TRGV5A0A0B4J1U4 118 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 K7EIM0 57 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 IGLV1-44P01699 117 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 TMEM258P61165 79 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 MSMPQ1L6U9 139 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 Q6ZT83 130 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 BEX4Q9NWD9 120 aaPredicted RBP9.6□□□□□ -0.87
FOXN3-201ENST00000261302 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 GATA4P43694 442 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
FOXN3-201ENST00000261302 ZNF256Q9Y2P7 627 aaPredicted RBP9.6□□□□□ -0.87
FOXN3-201ENST00000261302 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
FOXN3-201ENST00000261302 IGHV1-69DA0A0B4J2H0 117 aa9.59□□□□□ -0.87
FOXN3-201ENST00000261302 TSHBP01222 138 aa9.59□□□□□ -0.87
FOXN3-201ENST00000261302 LGALS3P17931 250 aaKnown RBP9.59□□□□□ -0.87
FOXN3-201ENST00000261302 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
FOXN3-201ENST00000261302 SPRR3Q9UBC9 169 aa9.59□□□□□ -0.87
FOXN3-201ENST00000261302 SMCR5Q8TEV8 140 aa9.59□□□□□ -0.87
FOXN3-201ENST00000261302 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 TRACP01848 142 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 HIST1H4AP62805 103 aaKnown RBP9.58□□□□□ -0.88
FOXN3-201ENST00000261302 Q5XG85 94 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 DEFB108BQ8NET1 73 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 ICOSQ9Y6W8 199 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 ABCA1O95477 2261 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 LST1O00453 97 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 CCL3L1P16619 93 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 SPANXN1Q5VSR9 72 aa9.58□□□□□ -0.88
FOXN3-201ENST00000261302 IGHV1-18A0A0C4DH31 117 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 ENSAO43768 121 aaKnown RBP9.57□□□□□ -0.88
FOXN3-201ENST00000261302 COX6CP09669 75 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 ATOX1O00244 68 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 SPRY3O43610 288 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 AGPAT4-IT1Q9H0P7 198 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 RELNP78509 3460 aa9.57□□□□□ -0.88
FOXN3-201ENST00000261302 A0A0J9YX75 114 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 OXTP01178 125 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 CNTFRP26992 372 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 M0R381 172 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 CCL21O00585 134 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 LEPROTO15243 131 aa9.56□□□□□ -0.88
FOXN3-201ENST00000261302 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
FOXN3-201ENST00000261302 SMAD5-AS1Q9Y6J3 95 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 IGHV3-72A0A0B4J1Y9 119 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 F8WDY8 70 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 UBE2E1P51965 193 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 DLX1P56177 255 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 IGFL4Q6B9Z1 124 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
FOXN3-201ENST00000261302 TMEM200BQ69YZ2 307 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 CYSTM1Q9H1C7 97 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 TENM4Q6N022 2769 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 ZGRF1Q86YA3 2104 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 FAM215AQ9Y5M1 114 aa9.54□□□□□ -0.88
FOXN3-201ENST00000261302 TRAV41A0A0B4J266 112 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 ADORA2A-AS1P86434 159 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 PPP1R17O96001 155 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 CLEC2BQ92478 149 aa9.53□□□□□ -0.88
FOXN3-201ENST00000261302 DLX6P56179 175 aa9.52□□□□□ -0.88
FOXN3-201ENST00000261302 ITLN2Q8WWU7 325 aaPredicted RBP9.52□□□□□ -0.88
FOXN3-201ENST00000261302 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.88
FOXN3-201ENST00000261302 DPH3P1Q9H4G8 78 aa9.52□□□□□ -0.88
FOXN3-201ENST00000261302 PEMTQ9UBM1 199 aa9.52□□□□□ -0.88
FOXN3-201ENST00000261302 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.88
FOXN3-201ENST00000261302 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.89
FOXN3-201ENST00000261302 PRRC2CQ9Y520 2896 aaKnown RBP9.51□□□□□ -0.89
FOXN3-201ENST00000261302 IGLV3-9A0A075B6K5 115 aa9.51□□□□□ -0.89
FOXN3-201ENST00000261302 SPRY2O43597 315 aa9.51□□□□□ -0.89
FOXN3-201ENST00000261302 SEM1Q6ZVN7 128 aa9.51□□□□□ -0.89
FOXN3-201ENST00000261302 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
FOXN3-201ENST00000261302 TRBV7-1A0A0A6YYK4 115 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-201ENST00000261302 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-201ENST00000261302 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-201ENST00000261302 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
FOXN3-201ENST00000261302 FAM19A4Q96LR4 140 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 POLEQ07864 2286 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 GPHB5Q86YW7 130 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 DSCR8Q96T75 97 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 LITAFQ99732 161 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 JPT2Q9H910 190 aa9.5□□□□□ -0.89
FOXN3-201ENST00000261302 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
FOXN3-201ENST00000261302 I3L3M4 83 aa9.49□□□□□ -0.89
FOXN3-201ENST00000261302 IGHV1-46P01743 117 aa9.49□□□□□ -0.89
FOXN3-201ENST00000261302 CNEP1R1Q8N9A8 125 aa9.49□□□□□ -0.89
FOXN3-201ENST00000261302 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms