RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 VCYO14598 125 aa8.69□□□□□ -1.02
TROAP-201ENST00000257909 ANXA2RQ3ZCQ2 193 aa8.69□□□□□ -1.02
TROAP-201ENST00000257909 APC2O95996 2303 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 POLEQ07864 2286 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 ARHGAP32A7KAX9 2087 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 TRAV8-4A0A0B4J246 113 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 OVOL1O14753 267 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 SPRY2O43597 315 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 IGF1P05019 195 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
TROAP-201ENST00000257909 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 ANKRD11Q6UB99 2663 aaPredicted RBP8.68□□□□□ -1.02
TROAP-201ENST00000257909 MAP1BP46821 2468 aaKnown RBP8.68□□□□□ -1.02
TROAP-201ENST00000257909 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.68□□□□□ -1.02
TROAP-201ENST00000257909 LEPROTO15243 131 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 CRLF1O75462 422 aa8.68□□□□□ -1.02
TROAP-201ENST00000257909 NXPH4O95158 308 aa8.67□□□□□ -1.02
TROAP-201ENST00000257909 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 CCDC179H3BU77 68 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 ATP6V0E1O15342 81 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 RNASE3P12724 160 aaKnown RBP8.66□□□□□ -1.02
TROAP-201ENST00000257909 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
TROAP-201ENST00000257909 MRPL23Q16540 153 aaKnown RBP8.66□□□□□ -1.02
TROAP-201ENST00000257909 Q1RN00 199 aa8.66□□□□□ -1.02
TROAP-201ENST00000257909 PRR30Q53SZ7 412 aaPredicted RBP8.66□□□□□ -1.02
TROAP-201ENST00000257909 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 TRBV30A0A0K0K1B3 111 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
TROAP-201ENST00000257909 ATP5J2P56134 94 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 LINC00315P59091 139 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 APRG1Q8IVJ8 170 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 LRBAP50851 2863 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 H3BMM0 161 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 H7C2G1 150 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 GNRH2O43555 120 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 MUSTN1Q8IVN3 82 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 UBE2WQ96B02 151 aa8.65□□□□□ -1.02
TROAP-201ENST00000257909 A0A0J9YX75 114 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
TROAP-201ENST00000257909 TCF15Q12870 199 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 FAM19A4Q96LR4 140 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 TEX49A0A1B0GTD5 131 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
TROAP-201ENST00000257909 M0R2P5 195 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 LGALS9O00182 355 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 IGHV4-39P01824 125 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 ACACAQ13085 2346 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 FAM159AQ6UWV7 190 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 VPREB3Q9UKI3 123 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
TROAP-201ENST00000257909 G3V318 75 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 PIEZO2Q9H5I5 2752 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 ZNF292O60281 2723 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 SOCS3O14543 225 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 ELANEP08246 267 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 MUC4Q99102 2169 aa8.62□□□□□ -1.03
TROAP-201ENST00000257909 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 F5H697 171 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 H3BT86 120 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 RHOHQ15669 191 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 TRIAP1O43715 76 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 ABCA4P78363 2273 aa8.61□□□□□ -1.03
TROAP-201ENST00000257909 LY6HO94772 140 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 COX6CP09669 75 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 ZNF22P17026 224 aaPredicted RBP8.6□□□□□ -1.03
TROAP-201ENST00000257909 FAM223BA6NKX1 122 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 FAM223AQ8IWN6 122 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 BEX4Q9NWD9 120 aaPredicted RBP8.6□□□□□ -1.03
TROAP-201ENST00000257909 GVINP1Q7Z2Y8 2422 aa8.6□□□□□ -1.03
TROAP-201ENST00000257909 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 Q8NA96 180 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 LINC01560Q8TB33 94 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 A0A087WWL8 130 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 H7C423 109 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 JPT2Q9H910 190 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 ICOSQ9Y6W8 199 aa8.59□□□□□ -1.03
TROAP-201ENST00000257909 RELNP78509 3460 aa8.59□□□□□ -1.04
TROAP-201ENST00000257909 NDUFA4O00483 81 aa8.58□□□□□ -1.04
TROAP-201ENST00000257909 FOXC1Q12948 553 aa8.58□□□□□ -1.04
TROAP-201ENST00000257909 SIRPDQ9H106 197 aa8.58□□□□□ -1.04
TROAP-201ENST00000257909 ZNF256Q9Y2P7 627 aaPredicted RBP8.58□□□□□ -1.04
TROAP-201ENST00000257909 DEFB1P60022 68 aa8.58□□□□□ -1.04
TROAP-201ENST00000257909 DEFB121Q5J5C9 76 aa8.58□□□□□ -1.04
TROAP-201ENST00000257909 TMEM126AQ9H061 195 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms