RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 CITED1Q99966 193 aa13□□□□□ -0.33
SORT1-201ENST00000256637 GAGE12HA6NDE8 117 aa13□□□□□ -0.33
SORT1-201ENST00000256637 C3orf79P0CE67 100 aa13□□□□□ -0.33
SORT1-201ENST00000256637 MDFICQ9P1T7 246 aa13□□□□□ -0.33
SORT1-201ENST00000256637 MED12LQ86YW9 2145 aa13□□□□□ -0.33
SORT1-201ENST00000256637 ZNF726P1Q15940 193 aa13□□□□□ -0.33
SORT1-201ENST00000256637 I3L2K1 104 aa12.99□□□□□ -0.33
SORT1-201ENST00000256637 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
SORT1-201ENST00000256637 K7EIM0 57 aa12.99□□□□□ -0.33
SORT1-201ENST00000256637 LINC01549A6NIU2 74 aa12.99□□□□□ -0.33
SORT1-201ENST00000256637 PRO3102Q9H379 93 aa12.99□□□□□ -0.33
SORT1-201ENST00000256637 IGLV11-55A0A075B6I3 123 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 RETNQ9HD89 108 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 TMEM14CQ9P0S9 112 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 Q6ZSV7 163 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 FAM231DQ6ZW35 169 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 C8orf31Q8N9H6 132 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 NANOS2P60321 138 aaKnown RBP12.98□□□□□ -0.33
SORT1-201ENST00000256637 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
SORT1-201ENST00000256637 EXPH5Q8NEV8 1989 aa12.97□□□□□ -0.33
SORT1-201ENST00000256637 ANKRD39Q53RE8 183 aa12.97□□□□□ -0.33
SORT1-201ENST00000256637 GTSF1LQ9H1H1 148 aa12.97□□□□□ -0.33
SORT1-201ENST00000256637 A0A0J9YWU9 116 aa12.97□□□□□ -0.33
SORT1-201ENST00000256637 ETV2O00321 342 aaPredicted RBP12.97□□□□□ -0.33
SORT1-201ENST00000256637 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.33
SORT1-201ENST00000256637 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
SORT1-201ENST00000256637 MRPL35Q9NZE8 188 aaKnown RBP12.96□□□□□ -0.33
SORT1-201ENST00000256637 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
SORT1-201ENST00000256637 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
SORT1-201ENST00000256637 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
SORT1-201ENST00000256637 LINC00269Q8N2A0 174 aa12.96□□□□□ -0.34
SORT1-201ENST00000256637 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.34
SORT1-201ENST00000256637 PTPRQQ9UMZ3 2332 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 PRR20EP86478 221 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 PRR20CP86479 221 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 PRR20DP86480 221 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 PRR20BP86481 221 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 PRR20AP86496 221 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 FGF6P10767 208 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 LMO4P61968 165 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
SORT1-201ENST00000256637 UTF1Q5T230 341 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 Q6ZWC4 215 aa12.95□□□□□ -0.34
SORT1-201ENST00000256637 DKK2Q9UBU2 259 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 IGHG2P01859 326 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 INSL3P51460 131 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 B9D2Q9BPU9 175 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 K7ERJ3 54 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
SORT1-201ENST00000256637 SPRY4Q9C004 299 aa12.94□□□□□ -0.34
SORT1-201ENST00000256637 TNCP24821 2201 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 NDUFB1O75438 58 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 CEMP1Q6PRD7 247 aaPredicted RBP12.93□□□□□ -0.34
SORT1-201ENST00000256637 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 NDUFA1O15239 70 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 CREBBPQ92793 2442 aa12.93□□□□□ -0.34
SORT1-201ENST00000256637 Q6ZTI0 123 aa12.92□□□□□ -0.34
SORT1-201ENST00000256637 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
SORT1-201ENST00000256637 CCL25O15444 150 aa12.92□□□□□ -0.34
SORT1-201ENST00000256637 PRM2P04554 102 aa12.92□□□□□ -0.34
SORT1-201ENST00000256637 SPAG11BQ08648 103 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 HIGD2AQ9BW72 106 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 NCOR1P1Q9H4R4 102 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 TEX22C9J3V5 150 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 K7EN84 100 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 SEC61GP60059 68 aa12.91□□□□□ -0.34
SORT1-201ENST00000256637 TMEM263Q8WUH6 116 aaKnown RBP12.9□□□□□ -0.34
SORT1-201ENST00000256637 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 TRAV13-2A0A0B4J235 113 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 TNFRSF13BO14836 293 aaPredicted RBP12.9□□□□□ -0.34
SORT1-201ENST00000256637 C1orf147Q96MC9 270 aaPredicted RBP12.9□□□□□ -0.34
SORT1-201ENST00000256637 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 IGKV4-1P06312 121 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 SH2D6Q7Z4S9 175 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 MED13LQ71F56 2210 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 Q6ZS46 218 aa12.9□□□□□ -0.34
SORT1-201ENST00000256637 MAJINQ3KP22 176 aa12.89□□□□□ -0.35
SORT1-201ENST00000256637 LTAP01374 205 aa12.89□□□□□ -0.35
SORT1-201ENST00000256637 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
SORT1-201ENST00000256637 NPSP0C0P6 89 aa12.89□□□□□ -0.35
SORT1-201ENST00000256637 UBE2D3P61077 147 aa12.89□□□□□ -0.35
SORT1-201ENST00000256637 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 J3QQQ9 107 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 HIST3H2BBQ8N257 126 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 WFDC9Q8NEX5 89 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 V9GYV3 84 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 ODF3L1Q8IXM7 274 aa12.88□□□□□ -0.35
SORT1-201ENST00000256637 ZNF664Q8N3J9 261 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 OPRPNQ99935 248 aaPredicted RBP12.87□□□□□ -0.35
SORT1-201ENST00000256637 BRI3O95415 125 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 C7orf33Q8WU49 177 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 UBE2CO00762 179 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 A8MWP6 167 aa12.87□□□□□ -0.35
SORT1-201ENST00000256637 CASC2Q6XLA1 102 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms