RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 HIST1H2BHQ93079 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 ZNF524Q96C55 264 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BNQ99877 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 HIST1H2BMQ99879 126 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 NPYP01303 97 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 LMO4P61968 165 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 PRO1854Q9UHT4 67 aa11.02□□□□□ -0.64
ZC3H4-201ENST00000253048 DOCK8Q8NF50 2099 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 FANCMQ8IYD8 2048 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 POLEQ07864 2286 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 K7EIM0 57 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 CXCL1P09341 107 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 P0DMU3 169 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 FAM231AP0DMU4 169 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 FAM231CP0DMU5 169 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 MIFP14174 115 aa11.02□□□□□ -0.65
ZC3H4-201ENST00000253048 ANAPC1Q9H1A4 1944 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 LINC01548A6NM66 108 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 C3orf79P0CE67 100 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 KIR2DL5BA0A0G2JN68 375 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 KIR2DL5BA0A0G2JPC4 375 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 KIR2DL5AQ8N109 375 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 NOTCH4Q99466 2003 aa11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 OPRPNQ99935 248 aaPredicted RBP11.01□□□□□ -0.65
ZC3H4-201ENST00000253048 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
ZC3H4-201ENST00000253048 IGF1P05019 195 aa11□□□□□ -0.65
ZC3H4-201ENST00000253048 NUP210Q8TEM1 1887 aaPredicted RBP11□□□□□ -0.65
ZC3H4-201ENST00000253048 PSMB8P28062 276 aa11□□□□□ -0.65
ZC3H4-201ENST00000253048 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
ZC3H4-201ENST00000253048 CYYR1Q96J86 154 aa11□□□□□ -0.65
ZC3H4-201ENST00000253048 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 SPTSSBQ8NFR3 76 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 COLCA2A8K830 154 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 DOCK7Q96N67 2140 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 MAJINQ3KP22 176 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 PRR15LQ9BU68 103 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 FAM231DQ6ZW35 169 aa10.99□□□□□ -0.65
ZC3H4-201ENST00000253048 NUPR2A6NF83 97 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 KIAA2026Q5HYC2 2103 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 K7EMI3 77 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 USP17L23D6RBM5 183 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 CCL25O15444 150 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 FSHBP01225 129 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 ZNF664Q8N3J9 261 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 F8VRH5 84 aa10.98□□□□□ -0.65
ZC3H4-201ENST00000253048 ODF1Q14990 250 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 HIST1H2BLQ99880 126 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 HIGD2AQ9BW72 106 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 LRRK1Q38SD2 2015 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 SIVA1O15304 175 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 DLEU1O43261 78 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 ADCYAP1P18509 176 aa10.97□□□□□ -0.65
ZC3H4-201ENST00000253048 FAM19A1Q7Z5A9 133 aa10.96□□□□□ -0.65
ZC3H4-201ENST00000253048 UBE2V1Q13404 147 aa10.96□□□□□ -0.65
ZC3H4-201ENST00000253048 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
ZC3H4-201ENST00000253048 DIRC1Q969H9 104 aa10.96□□□□□ -0.66
ZC3H4-201ENST00000253048 SMIM27A0A1W2PRY6 76 aa10.96□□□□□ -0.66
ZC3H4-201ENST00000253048 LINC01620Q4KN68 170 aa10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 LGALS9O00182 355 aa10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 DEFB114Q30KQ6 69 aa10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 F8W1H4 67 aa10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 H0YGX0 51 aa10.95□□□□□ -0.66
ZC3H4-201ENST00000253048 A0A0J9YX75 114 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 WI2-2373I1.2A0A1W2PRP0 233 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 PRSS47A8MTI9 375 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 REG3AQ06141 175 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 UNQ9165/PRO28630Q6UXU0 137 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 IGLV3-1P01715 115 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 NPSP0C0P6 89 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 UBE2D3P61077 147 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 PLXNA2O75051 1894 aa10.94□□□□□ -0.66
ZC3H4-201ENST00000253048 IL15RAQ13261 267 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 IGLV1-47P01700 117 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 TAX1BP3O14907 124 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 C3orf22Q8N5N4 141 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 SMR3AQ99954 134 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 C11orf52Q96A22 123 aa10.93□□□□□ -0.66
ZC3H4-201ENST00000253048 LINC00269Q8N2A0 174 aa10.92□□□□□ -0.66
ZC3H4-201ENST00000253048 UPK3BQ9BT76 320 aa10.92□□□□□ -0.66
ZC3H4-201ENST00000253048 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
ZC3H4-201ENST00000253048 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
ZC3H4-201ENST00000253048 FGF23Q9GZV9 251 aaPredicted RBP10.92□□□□□ -0.66
ZC3H4-201ENST00000253048 WISP2O76076 250 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 NTN5Q8WTR8 489 aaPredicted RBP10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 V9GYV3 84 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 ASPHD1Q5U4P2 390 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 LINC00322Q6ZN03 302 aaPredicted RBP10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
ZC3H4-201ENST00000253048 SMIM20Q8N5G0 67 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms