RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 C9orf85Q96MD7 179 aa8.75□□□□□ -1.01
APOBEC3A-201ENST00000249116 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 TRBV20OR9-2A0A075B6H5 130 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 RAB19A4D1S5 217 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 KRBOX1C9JBD0 128 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 TMEM250H0YL14 139 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 GNG4P50150 75 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 Q8N3U1 123 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 SMIM12Q96EX1 92 aa8.74□□□□□ -1.01
APOBEC3A-201ENST00000249116 CRYGDP07320 174 aa8.73□□□□□ -1.01
APOBEC3A-201ENST00000249116 ASIPP42127 132 aa8.73□□□□□ -1.01
APOBEC3A-201ENST00000249116 FRZBQ92765 325 aa8.73□□□□□ -1.01
APOBEC3A-201ENST00000249116 EIF5A2Q9GZV4 153 aaKnown RBP8.73□□□□□ -1.01
APOBEC3A-201ENST00000249116 PGPEP1LA6NFU8 196 aa8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 MGST1P10620 155 aaKnown RBP8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 XGP55808 180 aa8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 PARLQ9H300 379 aa8.72□□□□□ -1.01
APOBEC3A-201ENST00000249116 TMSB15BA0A087X1C1 80 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 H3BVH4 76 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 PSCAO43653 123 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 INAFM2P0DMQ5 153 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 TIRAPP58753 221 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 IL36BQ9NZH7 164 aa8.71□□□□□ -1.01
APOBEC3A-201ENST00000249116 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 CIDEAO60543 219 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 GCSHP23434 173 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 KRTAP10-1P60331 282 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 Q5VSD8 79 aa8.71□□□□□ -1.02
APOBEC3A-201ENST00000249116 TRAV8-6A0A0B4J262 113 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 SRP19P09132 144 aaKnown RBP8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 CXCL1P09341 107 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 CEBPGP53567 150 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 PTH2Q96A98 100 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
APOBEC3A-201ENST00000249116 ARMS2P0C7Q2 107 aa8.69□□□□□ -1.02
APOBEC3A-201ENST00000249116 RHOHQ15669 191 aa8.69□□□□□ -1.02
APOBEC3A-201ENST00000249116 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
APOBEC3A-201ENST00000249116 BIN3Q9NQY0 253 aa8.69□□□□□ -1.02
APOBEC3A-201ENST00000249116 IGLV5-52A0A0A0MRZ9 124 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 K7EN84 100 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 OR10J3Q5JRS4 329 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 OCC1Q8TAD7 63 aa8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 NTN5Q8WTR8 489 aaPredicted RBP8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 DAZAP1Q96EP5 407 aaKnown RBP8.68□□□□□ -1.02
APOBEC3A-201ENST00000249116 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 IBA57-AS1B1ANH7 110 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 RS1O15537 224 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 P01737 135 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 IFITM2Q01629 132 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 CFAP126Q5VTH2 177 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
APOBEC3A-201ENST00000249116 C9JQL5 133 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 SNAI2O43623 268 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 RAB14P61106 215 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 OR2D3Q8NGH3 330 aa8.66□□□□□ -1.02
APOBEC3A-201ENST00000249116 IGHV3-73A0A0B4J1V6 119 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 ZNF727A8MUV8 499 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 A8MWV9 139 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 M0R381 172 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 OR5AL1P0C617 328 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 RPS20P60866 119 aaKnown RBP8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 PEA15Q15121 130 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 LELP1Q5T871 98 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 ZFP82Q8N141 532 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 NUDT10Q8NFP7 164 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 NUDT11Q96G61 164 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 TMEM70Q9BUB7 260 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 RNASE7Q9H1E1 156 aaKnown RBP8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 Q9HAA7 133 aa8.65□□□□□ -1.02
APOBEC3A-201ENST00000249116 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 IGHV3-33P01772 117 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 IGHV3-30-3P0DP02 117 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 GZMBP10144 247 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 Q8N814 137 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
APOBEC3A-201ENST00000249116 ATP6V0E2Q8NHE4 81 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms