RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 FAM74A4Q5TZK3 123 aa8.72□□□□□ -1.01
VPREB3-201ENST00000248948 WFDC10BQ8IUB3 73 aa8.72□□□□□ -1.01
VPREB3-201ENST00000248948 OR10AG1Q8NH19 301 aa8.72□□□□□ -1.01
VPREB3-201ENST00000248948 SAMD10Q9BYL1 202 aa8.72□□□□□ -1.01
VPREB3-201ENST00000248948 JPT2Q9H910 190 aa8.72□□□□□ -1.01
VPREB3-201ENST00000248948 TRAV9-2A0A087WT02 112 aa8.71□□□□□ -1.02
VPREB3-201ENST00000248948 RAB19A4D1S5 217 aa8.71□□□□□ -1.02
VPREB3-201ENST00000248948 CRYGDP07320 174 aa8.71□□□□□ -1.02
VPREB3-201ENST00000248948 LINC00315P59091 139 aa8.71□□□□□ -1.02
VPREB3-201ENST00000248948 Q6ZSN1 163 aa8.71□□□□□ -1.02
VPREB3-201ENST00000248948 DAZAP1Q96EP5 407 aaKnown RBP8.71□□□□□ -1.02
VPREB3-201ENST00000248948 A0A087WWL8 130 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 XKRY2A2RUG3 117 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 RBFOX3A6NFN3 312 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 P01737 135 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 IGLC6P0CF74 106 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 EVI2AP22794 236 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 LELP1Q5T871 98 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 SPANXN1Q5VSR9 72 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 C10orf126Q8N4M7 172 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 ATP6V0E2Q8NHE4 81 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 AP1S3Q96PC3 154 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
VPREB3-201ENST00000248948 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
VPREB3-201ENST00000248948 TRAV8-6A0A0B4J262 113 aa8.69□□□□□ -1.02
VPREB3-201ENST00000248948 TNP2Q05952 138 aa8.69□□□□□ -1.02
VPREB3-201ENST00000248948 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
VPREB3-201ENST00000248948 NFE4Q86UQ8 179 aa8.69□□□□□ -1.02
VPREB3-201ENST00000248948 C14orf178Q8N769 122 aaPredicted RBP8.69□□□□□ -1.02
VPREB3-201ENST00000248948 OR2D3Q8NGH3 330 aa8.69□□□□□ -1.02
VPREB3-201ENST00000248948 IGHV3-38A0A0C4DH36 116 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 GAGE12JA6NER3 117 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 RAB4BP61018 213 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 GAGE1Q13065 139 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 GAGE4Q13068 117 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 GAGE5Q13069 117 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 ZNF56Q15929 161 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 GAGE13Q4V321 117 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 TOR2AQ5JU69 321 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 FER1L6-AS1Q8NA97 138 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
VPREB3-201ENST00000248948 A0A087WWC5 75 aa8.67□□□□□ -1.02
VPREB3-201ENST00000248948 CTRLP40313 264 aa8.67□□□□□ -1.02
VPREB3-201ENST00000248948 CACNG7P62955 275 aa8.67□□□□□ -1.02
VPREB3-201ENST00000248948 OR10J3Q5JRS4 329 aa8.67□□□□□ -1.02
VPREB3-201ENST00000248948 Q6ZRN7 208 aaPredicted RBP8.67□□□□□ -1.02
VPREB3-201ENST00000248948 OR10G8Q8NGN5 311 aa8.67□□□□□ -1.02
VPREB3-201ENST00000248948 F2Z2F3 143 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 K7EN84 100 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 GZMBP10144 247 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 RPL36AP83881 106 aaKnown RBP8.66□□□□□ -1.02
VPREB3-201ENST00000248948 RPL36ALQ969Q0 106 aaKnown RBP8.66□□□□□ -1.02
VPREB3-201ENST00000248948 TPPP3Q9BW30 176 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
VPREB3-201ENST00000248948 MSRB1Q9NZV6 116 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
VPREB3-201ENST00000248948 TRBV7-3A0A075B6L6 115 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 SMIM17P0DL12 118 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 LAGE3Q14657 143 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 TEX261Q6UWH6 196 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 FAM231DQ6ZW35 169 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 NUDT10Q8NFP7 164 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 NUDT11Q96G61 164 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 EIF5A2Q9GZV4 153 aaKnown RBP8.65□□□□□ -1.02
VPREB3-201ENST00000248948 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
VPREB3-201ENST00000248948 HERC2O95714 4834 aa8.64□□□□□ -1.03
VPREB3-201ENST00000248948 UBE2D3P61077 147 aa8.64□□□□□ -1.03
VPREB3-201ENST00000248948 UBE2D2P62837 147 aa8.64□□□□□ -1.03
VPREB3-201ENST00000248948 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
VPREB3-201ENST00000248948 RNASE7Q9H1E1 156 aaKnown RBP8.64□□□□□ -1.03
VPREB3-201ENST00000248948 Q9UF83 564 aa8.64□□□□□ -1.03
VPREB3-201ENST00000248948 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 TRGC1P0CF51 173 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 ERVFC1-1P60608 527 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 CT83Q5H943 113 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 WDR73Q6P4I2 378 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 SMIM7Q9BQ49 75 aa8.63□□□□□ -1.03
VPREB3-201ENST00000248948 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
VPREB3-201ENST00000248948 H7C1H1 209 aa8.62□□□□□ -1.03
VPREB3-201ENST00000248948 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
VPREB3-201ENST00000248948 CEBPGP53567 150 aa8.62□□□□□ -1.03
VPREB3-201ENST00000248948 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.62□□□□□ -1.03
VPREB3-201ENST00000248948 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
VPREB3-201ENST00000248948 ZNF727A8MUV8 499 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 F5H697 171 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 LINC01551Q86U37 167 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 DPH3P1Q9H4G8 78 aa8.61□□□□□ -1.03
VPREB3-201ENST00000248948 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 GATCO43716 136 aaKnown RBP8.6□□□□□ -1.03
VPREB3-201ENST00000248948 MGPP08493 103 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 SSTP61278 116 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 FAM74A3Q4VXF1 159 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 SMDT1Q9H4I9 107 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms