RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 GSKIPQ9P0R6 139 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 PSORS1C2Q9UIG4 136 aa1.5□□□□□ -2.17
PRKD3-201ENST00000234179 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 APOBP04114 4563 aaKnown RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 A0A0J9YXV3 536 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 F8WDY8 70 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 OR7C2O60412 319 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 PYDC2Q56P42 97 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 CFAP126Q5VTH2 177 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 MIC13Q5XKP0 118 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 SLC25A29Q8N8R3 303 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 UBE2WQ96B02 151 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 SOSTQ9BQB4 213 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 VPS25Q9BRG1 176 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 PARLQ9H300 379 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 GNG13Q9P2W3 67 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 IGLV10-54A0A075B6I4 117 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 FAM231BA6NCW3 169 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 M0R3E3 92 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 SCGB1D2O95969 90 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 LGALSLQ3ZCW2 172 aaPredicted RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 DAZ4Q86SG3 579 aaKnown RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 ISOC2Q96AB3 205 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 NMES1Q9C002 83 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 DAZ3Q9NR90 486 aaKnown RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 VAX2Q9UIW0 290 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 PKHD1P08F94 4074 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 A0A1W2PPV4 95 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 J3KRW8 73 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 TPT1P13693 172 aaKnown RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 SGK494Q96LW2 274 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 PSMG3Q9BT73 122 aaPredicted RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 NPCDR1Q9BY65 106 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 PLAC8Q9NZF1 115 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 IL36BQ9NZH7 164 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 FAM30AQ9NZY2 134 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 HMCN2Q8NDA2 5059 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 TRAV26-2A0A0B4J265 109 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 TRBV6-1A0A0K0K1D8 114 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 FABP5P3A8MUU1 101 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 GATCO43716 136 aaKnown RBP1.49□□□□□ -2.17
PRKD3-201ENST00000234179 TYMSP04818 313 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 CTF1Q16619 201 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 LINC00299Q6ZSB3 139 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM252Q8N6L7 170 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 BAALCQ8WXS3 180 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 ZFP30Q9Y2G7 519 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 ARL2-SNX15V9GYD0 113 aa1.49□□□□□ -2.17
PRKD3-201ENST00000234179 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 USP17L23D6RBM5 183 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 CCL25O15444 150 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 RAB4BP61018 213 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 ERCC8Q13216 396 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 PRNTQ86SH4 94 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TMEM75Q8N9X5 138 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 FXYD5Q96DB9 178 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 NAGKQ9UJ70 344 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 HERC1Q15751 4861 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 IGLV1-50A0A075B6I6 118 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 IGKV2-40A0A087WW87 121 aaPredicted RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 UBE2L5PA0A1B0GUS4 154 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 LINC00854A0A1B0GVQ3 168 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 C7orf66A4D0T2 115 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GAGE12JA6NER3 117 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 C5orf52A6NGY3 159 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 M0R036 132 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 IGKV2D-40P01614 121 aaPredicted RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TCRBP04435 133 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 SFTA3P0C7M3 94 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GAGE1Q13065 139 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GAGE4Q13068 117 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GAGE5Q13069 117 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 SPCS2Q15005 226 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF674Q2M3X9 581 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 GAGE13Q4V321 117 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 Q6ZRP5 223 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 OR2G3Q8NGZ4 309 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 KLK12Q9UKR0 248 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 PKD1P98161 4303 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TRBV7-3A0A075B6L6 115 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 TRBV25-1A0A075B6N4 114 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 H7C423 109 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 MBPP02686 304 aaPredicted RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 RGS21Q2M5E4 152 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 MUC21Q5SSG8 566 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 HIST1H2BAQ96A08 127 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 DPH3Q96FX2 82 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 FAM167A-AS1Q96KT0 104 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 LSM5Q9Y4Y9 91 aaKnown RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 A0A1W2PRE2 83 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 RPS20P60866 119 aaKnown RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 UBE2D3P61077 147 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 UBE2D2P62837 147 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 FLI1Q01543 452 aaPredicted RBP1.48□□□□□ -2.17
PRKD3-201ENST00000234179 ZNF506Q5JVG8 444 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 COX8CQ7Z4L0 72 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 OR5C1Q8NGR4 320 aa1.48□□□□□ -2.17
PRKD3-201ENST00000234179 STOML3Q8TAV4 291 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms