RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZFHX2Q9C0A1 2572 aaPredicted RBP6.41□□□□□ -1.38
APOB-201ENST00000233242 TCL1BO95988 128 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 IGFL3Q6UXB1 125 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 C17orf77Q96MU5 243 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 TRAV12-2A0A075B6T6 113 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 NREPQ16612 68 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 C11orf53Q8IXP5 236 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 TRAV4A0A0B4J268 109 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 NSUN5P1Q3KNT7 163 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 BPESC1Q9GZL8 116 aa6.41□□□□□ -1.38
APOB-201ENST00000233242 P0C879 139 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 RS1O15537 224 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 GNRH2O43555 120 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 MSMBP08118 114 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 P0DMU3 169 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 FAM231AP0DMU4 169 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 FAM231CP0DMU5 169 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 RPL39LQ96EH5 51 aaKnown RBP6.4□□□□□ -1.38
APOB-201ENST00000233242 J3QLI3 93 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 NAV2Q8IVL1 2488 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 COX7B2Q8TF08 81 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 RNF138Q8WVD3 245 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 PCNX3Q9H6A9 2034 aa6.4□□□□□ -1.38
APOB-201ENST00000233242 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 MIAQ16674 131 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 PSCAO43653 123 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 TMEM61Q8N0U2 210 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 F5H768 121 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 IGHV1-58A0A0C4DH39 117 aa6.4□□□□□ -1.39
APOB-201ENST00000233242 ABCA2Q9BZC7 2435 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 NDUFC1O43677 76 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 IGLV11-55A0A075B6I3 123 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 WISP1O95388 367 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 A0A0J9YXY3 114 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 TMEM105Q8N8V8 129 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 COLQQ9Y215 455 aaPredicted RBP6.39□□□□□ -1.39
APOB-201ENST00000233242 FRMPD3Q5JV73 1810 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 NDUFA7O95182 113 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 MRPL55Q7Z7F7 128 aaKnown RBP6.39□□□□□ -1.39
APOB-201ENST00000233242 BUB3O43684 328 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 WFDC9Q8NEX5 89 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 COX7A2LO14548 114 aa6.39□□□□□ -1.39
APOB-201ENST00000233242 RNASE13Q5GAN3 156 aaKnown RBP6.39□□□□□ -1.39
APOB-201ENST00000233242 ZNF503-AS2A6NEH8 195 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 APOC4P55056 127 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 MSRB1Q9NZV6 116 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 CTSGP08311 255 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 FAM236DA0A1B0GTK5 79 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 FAM236CP0DP71 79 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 C16orf54Q6UWD8 224 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 PTH2Q96A98 100 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 K7EQD1 137 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 MDFICQ9P1T7 246 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
APOB-201ENST00000233242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.38□□□□□ -1.39
APOB-201ENST00000233242 IGKV2-29A2NJV5 120 aaPredicted RBP6.38□□□□□ -1.39
APOB-201ENST00000233242 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 TLN1Q9Y490 2541 aaKnown RBP6.38□□□□□ -1.39
APOB-201ENST00000233242 XCL1P47992 114 aa6.38□□□□□ -1.39
APOB-201ENST00000233242 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 WI2-2373I1.2A0A1W2PRP0 233 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 NDUFB1O75438 58 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 NUP210Q8TEM1 1887 aaPredicted RBP6.37□□□□□ -1.39
APOB-201ENST00000233242 TLN2Q9Y4G6 2542 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 LECT2O14960 151 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 MBD6Q96DN6 1003 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 SETD2Q9BYW2 2564 aaPredicted RBP6.37□□□□□ -1.39
APOB-201ENST00000233242 HIST2H2BCQ6DN03 193 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 PIEZO1Q92508 2521 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 FAM240AA0A1B0GVK7 77 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 HIST2H2BDQ6DRA6 164 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 TP73-AS1Q9UF72 201 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 ZNF503Q96F45 646 aa6.37□□□□□ -1.39
APOB-201ENST00000233242 TEX22C9J3V5 150 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 TEX49A0A1B0GTD5 131 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 V9GYY9 64 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 TRBV7-3A0A075B6L6 115 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 IGKV1OR2-108A0A075B7D4 117 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 ETDCA0A1B0GVM5 59 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 U3KQE9 123 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 C20orf203Q8NBC4 194 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 IGLV2-14P01704 120 aa6.36□□□□□ -1.39
APOB-201ENST00000233242 C16orf74Q96GX8 76 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 FGF23Q9GZV9 251 aaPredicted RBP6.35□□□□□ -1.39
APOB-201ENST00000233242 LRRC75A-AS1Q8N1F1 130 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 RPL39P62891 51 aaKnown RBP6.35□□□□□ -1.39
APOB-201ENST00000233242 U3KQK5 164 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 K7EMT4 169 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 TNRC6BQ9UPQ9 1833 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms