RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TP53TG1Q9Y2A0 90 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 LOC400499M0QZD8 3231 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 CCL3L1P16619 93 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 SEC61GP60059 68 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 DEFB123Q8N688 67 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 CFAP47Q6ZTR5 3102 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 A0A0J9YXY3 114 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 M0R381 172 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 RPL35AP18077 110 aaKnown RBP9.81□□□□□ -0.84
MSH2-201ENST00000233146 LITAFQ99732 161 aa9.81□□□□□ -0.84
MSH2-201ENST00000233146 IGHV3-72A0A0B4J1Y9 119 aa9.8□□□□□ -0.84
MSH2-201ENST00000233146 C10orf105Q8TEF2 133 aa9.8□□□□□ -0.84
MSH2-201ENST00000233146 RNF7Q9UBF6 113 aa9.8□□□□□ -0.84
MSH2-201ENST00000233146 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
MSH2-201ENST00000233146 Q6ZSV7 163 aa9.79□□□□□ -0.84
MSH2-201ENST00000233146 LY6G6EA0A0G2JKS1 128 aa9.79□□□□□ -0.84
MSH2-201ENST00000233146 Q6ZT83 130 aa9.79□□□□□ -0.84
MSH2-201ENST00000233146 TMEM86BQ8N661 226 aa9.79□□□□□ -0.84
MSH2-201ENST00000233146 U3KQA8 63 aa9.79□□□□□ -0.84
MSH2-201ENST00000233146 CEP250Q9BV73 2442 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 DAND5Q8N907 189 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 DYNLRB1Q9NP97 96 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 SPRY3O43610 288 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 IGLV1-44P01699 117 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 LAMA5O15230 3695 aa9.78□□□□□ -0.84
MSH2-201ENST00000233146 NTN3O00634 580 aaPredicted RBP9.77□□□□□ -0.84
MSH2-201ENST00000233146 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
MSH2-201ENST00000233146 GFRALQ6UXV0 394 aa9.77□□□□□ -0.85
MSH2-201ENST00000233146 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
MSH2-201ENST00000233146 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
MSH2-201ENST00000233146 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 RS1O15537 224 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 PPP1R17O96001 155 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 TMEM200BQ69YZ2 307 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 C9orf85Q96MD7 179 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 PKIGQ9Y2B9 76 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 LPAL2Q16609 132 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 PRSS2P07478 247 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 EDN2P20800 178 aa9.76□□□□□ -0.85
MSH2-201ENST00000233146 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
MSH2-201ENST00000233146 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
MSH2-201ENST00000233146 DAZ1Q9NQZ3 744 aaKnown RBP9.76□□□□□ -0.85
MSH2-201ENST00000233146 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
MSH2-201ENST00000233146 NDUFC2-KCTD14E9PQ53 114 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 CCL4P13236 92 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 TMEM61Q8N0U2 210 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 PRORYQ9H606 182 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 MALRD1Q5VYJ5 2156 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 IGHV3OR16-10A0A075B7F0 116 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 TRGV5A0A0B4J1U4 118 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 TIRAPP58753 221 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 MBD3L2Q8NHZ7 208 aaPredicted RBP9.75□□□□□ -0.85
MSH2-201ENST00000233146 S4R3C0 116 aa9.75□□□□□ -0.85
MSH2-201ENST00000233146 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 PSMB8P28062 276 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 KLRB1Q12918 225 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 C22orf24Q9Y442 160 aa9.74□□□□□ -0.85
MSH2-201ENST00000233146 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 FHL2Q14192 279 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 PLCE1Q9P212 2302 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 MGPP08493 103 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 RNF182Q8N6D2 247 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 ZNF580Q9UK33 172 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
MSH2-201ENST00000233146 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
MSH2-201ENST00000233146 BUB3O43684 328 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 POLR2KP53803 58 aaKnown RBP9.72□□□□□ -0.85
MSH2-201ENST00000233146 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 SPRR3Q9UBC9 169 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 MIAQ16674 131 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 NACAE9PAV3 2078 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 NPC2P61916 151 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 V9GYY9 64 aa9.72□□□□□ -0.85
MSH2-201ENST00000233146 NDUFC2O95298 119 aa9.71□□□□□ -0.85
MSH2-201ENST00000233146 ADARB2-AS1A8MUL3 147 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 BEAN1Q3B7T3 259 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 DEFB127Q9H1M4 99 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 IGHV4OR15-8A0A075B7B6 117 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 A0A087WW49 117 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 USP17L23D6RBM5 183 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 IGHV1-69P01742 117 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
MSH2-201ENST00000233146 INAFM2P0DMQ5 153 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 DEFB104AQ8WTQ1 72 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 SPTBN4Q9H254 2564 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 Q6JHZ5 121 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 C9orf139Q6ZV77 190 aa9.7□□□□□ -0.86
MSH2-201ENST00000233146 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
MSH2-201ENST00000233146 COX7A2LO14548 114 aa9.69□□□□□ -0.86
MSH2-201ENST00000233146 BAALC-AS2P0C853 105 aa9.69□□□□□ -0.86
MSH2-201ENST00000233146 M0R1W7 72 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms